Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RN7SKP116-201ENST00000516902 319 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC103783.1-201ENST00000520506 373 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AL512310.1-201ENST00000548639 172 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC017071.1-201ENST00000564407 2204 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC126124.2-201ENST00000413542 321 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC069540.1-201ENST00000446320 988 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC016696.1-201ENST00000446949 318 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 HMGN2P7-201ENST00000456186 273 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 EIF5A2P1-201ENST00000564027 460 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC106785.3-201ENST00000564064 847 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC008638.3-201ENST00000603341 463 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 TUG1_1.1-201ENST00000610654 145 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOPBP1Q92547 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TOPBP1Q92547 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOPBP1Q92547 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOPBP1Q92547 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 SNORD67-201ENST00000390833 111 ntBASIC5.32□□□□□ -1.56
TOPBP1Q92547 RPS4XP8-201ENST00000402039 771 ntBASIC5.32□□□□□ -1.56
TOPBP1Q92547 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 FTH1P11-201ENST00000517577 551 ntBASIC5.32□□□□□ -1.56
TOPBP1Q92547 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 AC067852.4-201ENST00000590314 478 ntBASIC5.32□□□□□ -1.56
TOPBP1Q92547 AL359535.1-201ENST00000612100 1087 ntBASIC5.32□□□□□ -1.56
TOPBP1Q92547 AC139713.2-210ENST00000641741 992 ntBASIC5.32□□□□□ -1.56
TOPBP1Q92547 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
TOPBP1Q92547 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOPBP1Q92547 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 MTCO1P8-201ENST00000416914 1523 ntBASIC5.31□□□□□ -1.56
TOPBP1Q92547 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 U3.12-201ENST00000364498 214 ntBASIC5.31□□□□□ -1.56
TOPBP1Q92547 AL031679.1-201ENST00000400616 525 ntBASIC5.31□□□□□ -1.56
TOPBP1Q92547 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 BNIP3P38-201ENST00000601117 544 ntBASIC5.31□□□□□ -1.56
TOPBP1Q92547 PRELID3BP8-201ENST00000604148 295 ntBASIC5.31□□□□□ -1.56
TOPBP1Q92547 AC233309.1-201ENST00000619522 751 ntBASIC5.31□□□□□ -1.56
TOPBP1Q92547 AC099506.2-201ENST00000623074 221 ntBASIC5.31□□□□□ -1.56
TOPBP1Q92547 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.31□□□□□ -1.56
TOPBP1Q92547 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
TOPBP1Q92547 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TOPBP1Q92547 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TOPBP1Q92547 RN7SKP222-201ENST00000410651 315 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 RPL6P21-201ENST00000418672 846 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 AL035407.1-201ENST00000429211 571 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 RPS4XP13-201ENST00000483219 789 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 RNA5SP367-201ENST00000516557 118 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 RPL23AP92-201ENST00000603609 255 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC231759.1-201ENST00000616455 597 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC138627.1-204ENST00000641894 765 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.3□□□□□ -1.56
TOPBP1Q92547 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 AC116096.1-201ENST00000566804 2314 ntBASIC5.3□□□□□ -1.56
TOPBP1Q92547 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TOPBP1Q92547 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
TOPBP1Q92547 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 AC117440.1-201ENST00000474107 571 ntBASIC5.29□□□□□ -1.56
TOPBP1Q92547 AC025445.1-201ENST00000502728 300 ntBASIC5.29□□□□□ -1.56
TOPBP1Q92547 HIGD1AP13-201ENST00000509878 289 ntBASIC5.29□□□□□ -1.56
TOPBP1Q92547 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 RNU1-41P-201ENST00000516161 162 ntBASIC5.29□□□□□ -1.56
TOPBP1Q92547 RNU1-48P-201ENST00000516400 162 ntBASIC5.29□□□□□ -1.56
TOPBP1Q92547 AC091544.4-201ENST00000555268 342 ntBASIC5.29□□□□□ -1.56
TOPBP1Q92547 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 HMGB1P6-201ENST00000569046 646 ntBASIC5.29□□□□□ -1.56
TOPBP1Q92547 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 AC000403.1-201ENST00000613696 3585 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms