Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR3974-201ENST00000637126 96 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC090971.4-201ENST00000560291 1800 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 ZFRP1-201ENST00000457579 2970 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.65□□□□□ -1.66
HMGB4Q8WW32 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.66
HMGB4Q8WW32 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.65□□□□□ -1.66
HMGB4Q8WW32 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGB4Q8WW32 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AL391994.1-201ENST00000254724 282 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 RNU6-216P-201ENST00000363282 104 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 RNU6-921P-201ENST00000384361 107 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC011998.1-201ENST00000433403 117 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 RPS20P1-201ENST00000434853 354 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 RPS25P9-201ENST00000435591 252 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 RPS26P56-201ENST00000444468 240 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 CYCSP24-201ENST00000445119 316 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 RPL5P23-201ENST00000496040 868 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC025164.1-201ENST00000496249 478 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC147055.4-201ENST00000504399 745 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC018797.3-201ENST00000513388 1241 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 MTCO1P35-201ENST00000515270 228 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 HNRNPKP5-201ENST00000515300 253 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC105031.1-201ENST00000518550 476 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC087373.1-201ENST00000524920 491 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 SLC2A13P1-201ENST00000531560 322 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC090888.1-201ENST00000561335 1141 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 BNIP3P5-201ENST00000562290 498 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 MIR3160-1-201ENST00000577972 85 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 SNORD39.3-201ENST00000584451 71 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 VN1R90P-201ENST00000595717 726 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 Z99497.2-201ENST00000603634 310 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC069304.2-201ENST00000605154 435 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC023043.4-201ENST00000612081 449 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AL392048.1-201ENST00000613946 534 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC114781.5-201ENST00000615297 108 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC079248.2-201ENST00000623779 326 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC007671.2-201ENST00000637344 619 ntBASIC4.65□□□□□ -1.67
HMGB4Q8WW32 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGB4Q8WW32 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AL672167.1-204ENST00000641875 3017 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RNU6-1200P-201ENST00000384162 107 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RNU6-441P-201ENST00000384545 106 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 MIR659-201ENST00000384963 97 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AL450338.1-201ENST00000407987 512 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RNU2-21P-201ENST00000410368 188 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RN7SKP263-201ENST00000411194 309 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 TIMM9P2-201ENST00000419324 266 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC062016.2-201ENST00000420950 676 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC012519.1-201ENST00000424588 610 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 SDCBPP2-201ENST00000424643 885 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms