Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 IGHV3-29-201ENST00000604817 344 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 SNORA79B-201ENST00000410557 148 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC009263.1-201ENST00000441193 1239 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 RFPL1S-203ENST00000539579 330 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 MIR2682-201ENST00000580305 110 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 BDH2P1-201ENST00000602288 736 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC110741.2-201ENST00000605278 268 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 HIGD1AP12-201ENST00000427832 281 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 ELOCP18-201ENST00000434209 337 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AL135938.1-201ENST00000443141 297 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 OR4A12P-201ENST00000530847 918 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC127502.3-201ENST00000636170 1206 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC112198.2-201ENST00000426589 6996 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AL157394.1-201ENST00000562983 1224 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AP001005.3-201ENST00000622049 129 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 NMD3P1-201ENST00000439704 1488 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC062016.1-201ENST00000355719 319 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.29□□□□□ -2.04
ALMS1Q8TCU4 RSL24D1P1-201ENST00000404972 493 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AL139132.1-201ENST00000431587 344 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AL450263.2-201ENST00000439400 589 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 OR9N1P-201ENST00000491296 333 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 RNA5SP356-201ENST00000515972 94 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC002075.2-201ENST00000425207 252 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC098824.1-201ENST00000453565 980 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC099560.2-201ENST00000457554 255 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 EIF2S2P4-201ENST00000461070 984 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC004024.1-201ENST00000549244 247 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 MIR3074-201ENST00000384885 81 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AL138878.1-201ENST00000405131 347 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 RAC1P3-201ENST00000416129 580 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC073069.1-201ENST00000428657 441 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC096638.2-201ENST00000434965 711 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AL162388.1-201ENST00000450912 352 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC104984.5-201ENST00000586878 94 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms