Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CYCSP41-201ENST00000616920 296 ntBASIC2.77□□□□□ -1.97
CCDC168Q8NDH2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC168Q8NDH2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC168Q8NDH2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC168Q8NDH2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 RSL24D1P4-201ENST00000400938 484 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 NPM1P37-201ENST00000403105 874 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 DYNLL1P7-201ENST00000429273 258 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 RPS17P11-201ENST00000474297 293 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC021146.3-201ENST00000511911 260 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC026523.2-201ENST00000625039 7739 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 snoU13.23-201ENST00000458863 104 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 AC064859.1-201ENST00000624741 174 ntBASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC168Q8NDH2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 KCTD9P3-201ENST00000434597 1169 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 RPL7P12-201ENST00000446719 750 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 UBA52P3-201ENST00000491303 382 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AC109458.1-201ENST00000508858 316 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 SNORD91B-202ENST00000608459 222 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AC003985.2-201ENST00000562268 1669 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 Y_RNA.355-201ENST00000365462 98 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 RN7SKP111-201ENST00000410349 271 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 RNU4-47P-201ENST00000410876 114 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AC007899.1-201ENST00000412776 775 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 MTND4P22-201ENST00000413116 1169 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 RPL36AP21-201ENST00000490372 323 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AC022106.2-201ENST00000620114 757 ntBASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC168Q8NDH2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 AC063979.1-201ENST00000415539 377 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 BX276092.3-201ENST00000424182 230 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 NDUFB1P1-201ENST00000435191 180 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 AC112198.1-201ENST00000505369 1220 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 PCBP2P3-201ENST00000509726 843 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 AC008413.1-201ENST00000511864 177 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 AC114781.4-201ENST00000513707 639 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 SETP12-201ENST00000514068 805 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 OR4R3P-201ENST00000525084 838 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 MIR4425-201ENST00000580572 84 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 EIF1P6-201ENST00000600054 334 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 OR5AC4P-202ENST00000642086 985 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 RPL21P112-201ENST00000434403 463 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 RN7SL594P-201ENST00000470590 287 ntBASIC2.74□□□□□ -1.97
CCDC168Q8NDH2 FCF1P8-201ENST00000510322 597 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms