Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AP000866.6-201ENST00000638898 3579 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC235565.1-201ENST00000456962 1325 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC005332.9-201ENST00000620266 2921 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AL031123.3-201ENST00000623345 1837 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AL591848.4-201ENST00000567832 3472 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AL359091.1-201ENST00000449048 1734 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 Y_RNA.26-201ENST00000362539 101 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AL672167.2-201ENST00000377164 879 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 RNU6-244P-201ENST00000391028 104 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 OR6C66P-201ENST00000414917 930 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC092832.1-201ENST00000422934 400 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AP001324.1-201ENST00000428553 399 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 RPL7P4-203ENST00000430239 730 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 SNRPEP7-201ENST00000438350 220 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 FTLP8-201ENST00000446770 267 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC133473.1-201ENST00000455173 299 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC090142.1-201ENST00000465776 462 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 SNORA58-201ENST00000505219 137 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 RNU6-470P-201ENST00000515954 104 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 RNU6-1212P-201ENST00000517023 104 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AL118558.2-201ENST00000556294 238 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 MIR3118-1-201ENST00000581787 76 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC012433.1-201ENST00000588916 398 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AL513327.3-201ENST00000602618 469 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 MIR6793-201ENST00000612376 63 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AL136228.1-201ENST00000622221 319 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC022325.1-201ENST00000502748 2199 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC016251.2-201ENST00000623393 3089 ntBASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS3Q8IXF0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 OR56A5-201ENST00000340110 738 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 RNA5SP242-201ENST00000364171 118 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 RAC1P3-201ENST00000416129 580 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 RPL35AP31-201ENST00000418340 337 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 RPL7P59-201ENST00000447700 943 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 BX248409.1-201ENST00000455497 255 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 HMGB3P30-201ENST00000457863 606 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 RPS29P26-201ENST00000477483 171 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC068522.1-201ENST00000482895 345 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 CEACAMP10-202ENST00000495431 496 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms