Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC011840.5-201ENST00000582125 771 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 FAM106CP-201ENST00000582212 507 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC044792.1-201ENST00000593294 196 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 BNIP3P9-201ENST00000603714 553 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC133644.2-201ENST00000608142 540 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL354760.1-201ENST00000608357 643 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL049794.2-201ENST00000616301 365 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL022401.1-201ENST00000619498 108 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL359697.1-201ENST00000624879 587 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.84□□□□□ -1.64
VRK3Q8IV63 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.84□□□□□ -1.64
VRK3Q8IV63 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC017104.4-201ENST00000636283 1592 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 Z99496.1-201ENST00000469424 1477 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AP002001.2-201ENST00000529025 1469 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 IRF5P1-201ENST00000504852 2164 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 RNY4P14-201ENST00000363656 96 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 RNA5SP88-201ENST00000365560 109 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 RNU6-452P-201ENST00000384406 107 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 RNU6-244P-201ENST00000391028 104 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC007066.1-201ENST00000392902 381 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC009237.5-201ENST00000414271 501 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 CHEK2P3-201ENST00000416118 248 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 TBCAP2-201ENST00000416175 326 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC093414.1-201ENST00000434712 514 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 UBE2FP3-201ENST00000436366 524 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 CEACAMP7-201ENST00000444105 496 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 GDI2P2-201ENST00000445131 608 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC000111.2-201ENST00000448200 210 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 DNAJC19P8-201ENST00000452887 259 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC073073.1-201ENST00000493920 463 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 STMN1P2-201ENST00000508435 439 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC087276.1-201ENST00000529659 480 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AP001804.2-201ENST00000533932 910 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AL390334.1-201ENST00000556395 450 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 GTF2IP8-201ENST00000560687 584 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 BPTFP1-201ENST00000579209 492 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC090616.5-202ENST00000582111 297 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 VN1R79P-201ENST00000593540 513 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC064836.2-201ENST00000609491 462 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 BX323046.1-201ENST00000610145 535 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC068870.2-201ENST00000620635 389 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC018816.2-201ENST00000621460 353 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC138649.3-201ENST00000622154 254 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 PROS2P-201ENST00000474651 1951 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC104623.2-202ENST00000623477 4002 ntBASIC4.83□□□□□ -1.64
VRK3Q8IV63 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VRK3Q8IV63 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VRK3Q8IV63 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC009643.2-201ENST00000603543 1448 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 MTND4P16-201ENST00000466108 1367 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 RPL21P132-201ENST00000331267 462 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms