Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CTR9Q6PD62 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTR9Q6PD62 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTR9Q6PD62 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 U3.15-201ENST00000365398 212 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 MIR320B1-201ENST00000390209 79 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 RNU6-1176P-201ENST00000390955 107 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 RNU6-796P-201ENST00000391086 107 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTR9Q6PD62 ZNF602P-201ENST00000405929 924 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 RNU2-17P-201ENST00000410290 190 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 AL158825.1-201ENST00000414735 521 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 VN1R42P-201ENST00000424651 344 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC073069.1-201ENST00000428657 441 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 YWHAQP9-201ENST00000445891 512 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 Z95327.1-201ENST00000446082 482 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 RNU7-170P-201ENST00000459303 61 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC007991.1-201ENST00000522680 631 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 OR4C2P-201ENST00000530855 1064 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 MIR3158-1-201ENST00000583596 81 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC245389.1-201ENST00000605141 529 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.57□□□□□ -1.68
CTR9Q6PD62 AC106858.1-201ENST00000637497 429 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTR9Q6PD62 PRO1804-201ENST00000623780 2050 ntBASIC4.57□□□□□ -1.68
CTR9Q6PD62 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 MAPK10-372ENST00000641954 3413 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 MTCO1P4-201ENST00000520516 1409 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 TNPO1P3-201ENST00000436471 2662 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 SNORA63.3-201ENST00000362682 132 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 RNU6-666P-201ENST00000363499 107 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 HMGB1P10-201ENST00000395823 563 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 AL590704.1-201ENST00000402856 794 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 RAB9AP3-201ENST00000412737 573 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 TATDN1P1-201ENST00000414123 891 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AL139247.1-201ENST00000422768 325 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 USP9YP7-201ENST00000436723 430 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 RAB9AP1-201ENST00000449393 573 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 USP9YP32-201ENST00000452432 430 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 UBDP1-202ENST00000457888 382 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 HAUS1P1-201ENST00000505275 832 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC022695.1-201ENST00000522089 237 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 CIR1P1-201ENST00000524055 1133 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC112230.1-201ENST00000604342 547 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 AL049634.3-201ENST00000604968 457 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC006133.1-201ENST00000617106 264 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AC012442.3-202ENST00000636742 206 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 AL592494.2-201ENST00000425455 1548 ntBASIC4.56□□□□□ -1.68
CTR9Q6PD62 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTR9Q6PD62 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.56□□□□□ -1.68
CTR9Q6PD62 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 RNU6-1005P-201ENST00000384519 107 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 SNORA48.7-201ENST00000391302 135 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 ATP5F1P3-201ENST00000397213 657 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 RNU6ATAC-201ENST00000408749 126 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL606495.1-201ENST00000422100 813 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL591419.1-201ENST00000427423 339 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL512637.2-201ENST00000431287 1256 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL035246.1-201ENST00000433554 1255 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 MTCO1P52-201ENST00000433928 531 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms