Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 DHX40P1-201ENST00000588725 1412 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC079741.1-201ENST00000321498 212 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 RNU6-931P-201ENST00000363850 107 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 RNU6-244P-201ENST00000391028 104 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC104297.1-201ENST00000393779 870 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 RNU6-920P-201ENST00000410926 92 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 SNRPFP1-201ENST00000414761 252 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 UQCRBP1-201ENST00000421129 336 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 RPEP3-201ENST00000425462 676 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 MTND4P18-201ENST00000447010 465 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC073264.2-201ENST00000448886 166 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC079776.3-201ENST00000450665 370 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 MTCYBP1-201ENST00000454315 1119 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 PSMC1P13-201ENST00000458195 985 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 GAPDHP36-201ENST00000480688 918 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC011825.1-201ENST00000484967 388 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 CBX3P3-201ENST00000508108 532 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC083923.1-201ENST00000523708 376 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AP006289.1-201ENST00000538089 277 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC027104.1-201ENST00000563702 681 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 MIR4666A-201ENST00000580160 79 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 RN7SL176P-201ENST00000580352 264 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 MIR3611-201ENST00000584484 83 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC008782.1-201ENST00000603386 430 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 AC116165.2-201ENST00000616705 206 ntBASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF549Q6P9A3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 RNU6-1215P-201ENST00000384441 102 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 GLULP6-201ENST00000399502 913 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 RNU2-16P-201ENST00000410712 136 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 RPS20P14-201ENST00000412545 360 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 MTCO2P34-201ENST00000421994 607 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 MTCYBP5-201ENST00000423752 1135 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 SKP1P3-201ENST00000429280 487 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 ATP5F1P1-201ENST00000433775 569 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 FTH1P16-201ENST00000435241 552 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 HMGB1P45-201ENST00000435986 653 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 RPS26P30-201ENST00000443431 335 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC073587.1-201ENST00000447093 876 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 OR52A4P-201ENST00000472867 958 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC147055.4-201ENST00000504399 745 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC004069.2-201ENST00000505438 1114 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC008885.2-201ENST00000509506 930 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC079140.3-201ENST00000511111 550 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 HMGB3P13-201ENST00000511263 607 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 HNRNPKP5-201ENST00000515300 253 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 RNA5SP497-201ENST00000516081 97 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 RNU6-1004P-201ENST00000516584 111 ntBASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF549Q6P9A3 AC023632.1-201ENST00000518463 375 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms