Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 AL121890.1-201ENST00000435457 205 ntBASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 AC112653.1-201ENST00000443851 386 ntBASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 AC128713.1-201ENST00000471495 306 ntBASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 SETP12-201ENST00000514068 805 ntBASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 KCTD9P6-201ENST00000522306 950 ntBASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 TTC39DP-201ENST00000416781 1688 ntBASIC2.15□□□□□ -2.07
VPS13DQ5THJ4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 RPL6P21-201ENST00000418672 846 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 RPL12P26-201ENST00000452430 487 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 RPL23AP71-201ENST00000470966 469 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC068724.1-201ENST00000487100 792 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC007566.2-201ENST00000603642 413 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AL031679.1-201ENST00000400616 525 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 RPS12P5-201ENST00000423449 371 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 TCP11X3P-202ENST00000514289 1254 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC004024.1-201ENST00000549244 247 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC087190.4-201ENST00000574616 8334 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 OR56A5-201ENST00000340110 738 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 SNORA5B-201ENST00000363786 132 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 GTF3AP2-201ENST00000557014 266 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AL122125.1-201ENST00000616999 600 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 MIR4727-201ENST00000622232 55 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 CST9LP2-201ENST00000437612 320 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 AC020914.4-201ENST00000597690 277 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 uc_338.1-201ENST00000612113 180 ntBASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VPS13DQ5THJ4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC090281.1-201ENST00000523019 276 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC087888.1-201ENST00000550884 1254 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC104984.5-201ENST00000586878 94 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AL365400.2-201ENST00000605604 902 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AP004607.9-201ENST00000618202 316 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AL669942.2-201ENST00000620352 697 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AL359693.1-201ENST00000614959 2407 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 OR13C3-201ENST00000374781 1108 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 HSPE1P8-201ENST00000406997 288 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 CR381670.1-201ENST00000624291 1693 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms