Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ANKRD55Q3KP44 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 ZNF734P-201ENST00000419494 1534 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 SNORA7.2-201ENST00000364446 145 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 SNORA71.2-201ENST00000364941 134 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RNA5SP87-201ENST00000384155 118 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 MIR16-1-201ENST00000385271 89 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 MIR937-201ENST00000401271 86 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RNU2-37P-201ENST00000410695 177 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RPL23AP89-201ENST00000439324 255 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RPL23AP93-201ENST00000440847 484 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RPL23AP43-201ENST00000446445 471 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 NPM1P49-201ENST00000448027 714 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 Z99714.1-201ENST00000450463 807 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RPS27AP17-201ENST00000463344 455 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RPL6P9-201ENST00000466502 859 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC110775.1-201ENST00000513721 462 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RN7SKP276-201ENST00000516242 268 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 RNA5SP73-201ENST00000516744 108 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 snoZ278.1-201ENST00000517059 112 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AP001880.2-201ENST00000538233 448 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC245884.10-201ENST00000597355 337 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC024940.4-201ENST00000605507 246 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 FAM25E-202ENST00000608562 189 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC087385.3-201ENST00000620477 187 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AC090772.4-201ENST00000623599 362 ntBASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ANKRD55Q3KP44 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 ZNF137P-201ENST00000456718 1920 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 RNA5SP191-201ENST00000362585 102 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 RNU6-575P-201ENST00000411326 105 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 RPS7P9-201ENST00000414704 586 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 P2RY10P2-201ENST00000416730 913 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 MTND4P3-201ENST00000417829 541 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC027644.1-201ENST00000419595 298 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 PTP4A1P5-201ENST00000420305 455 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC092647.1-201ENST00000420654 287 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 CYP4F29P-201ENST00000420685 446 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 SFR1P2-201ENST00000421841 730 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 RPP40P1-201ENST00000426762 456 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC114973.1-201ENST00000429057 632 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC068287.1-201ENST00000430283 295 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AL049745.1-201ENST00000433953 286 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AL162591.2-201ENST00000449634 317 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 SBDSP1-204ENST00000453858 737 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 SYPL1P1-201ENST00000473622 768 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC006517.1-201ENST00000480485 328 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AC011005.3-201ENST00000491624 395 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 AP001086.1-201ENST00000494882 321 ntBASIC3.6□□□□□ -1.83
ANKRD55Q3KP44 MTND4LP2-201ENST00000502312 285 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms