Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 RNA5SP167-201ENST00000365461 116 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AL353692.2-201ENST00000407054 335 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 DYNLL1P7-201ENST00000429273 258 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 FTH1P6-201ENST00000430768 320 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AL050321.1-201ENST00000432363 400 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 MED6P1-201ENST00000439659 713 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 HMGN1P11-201ENST00000508668 303 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 IGHV3-32-201ENST00000519182 355 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 DUXAP2-201ENST00000519198 589 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 OR5B10P-201ENST00000532869 642 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 OR4U1P-201ENST00000554958 912 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AC090877.1-201ENST00000561418 344 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AC055764.2-201ENST00000610089 670 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AC096577.2-201ENST00000611455 153 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AC084757.4-201ENST00000616350 526 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AC022079.2-201ENST00000619739 566 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 AC015726.3-201ENST00000624501 418 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 MTCO1P12-201ENST00000414273 1543 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 MTND4P31-201ENST00000425607 1343 ntBASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 MIR448-201ENST00000362131 111 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 RNA5SP52-201ENST00000362448 134 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 SNORD9-201ENST00000362566 104 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 MIR1183-201ENST00000408856 89 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC019070.1-201ENST00000415008 1024 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 RAC1P3-201ENST00000416129 580 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 EIF4EP1-201ENST00000422311 642 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC011742.1-201ENST00000431448 434 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 MTND2P8-201ENST00000450555 1025 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC008155.2-201ENST00000464337 397 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC025946.2-201ENST00000603398 234 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 U3.45-201ENST00000607547 219 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC055839.1-201ENST00000634467 498 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AL392088.2-201ENST00000637607 285 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AL031985.3-201ENST00000565390 2449 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 MAPK10-253ENST00000641010 4072 ntBASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
SHROOM1Q2M3G4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AL353743.4-201ENST00000422653 1547 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 SNORD51.1-201ENST00000365405 77 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC093698.1-201ENST00000423843 571 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 ZNF965P-201ENST00000432501 817 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 MTCO1P52-201ENST00000433928 531 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 MTND4P15-201ENST00000437913 1033 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms