Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 FTH1P6-201ENST00000430768 320 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 ELOCP8-201ENST00000439309 332 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 ELOCP15-201ENST00000442090 332 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKDCP78527 UBE2V2P4-201ENST00000447495 259 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKDCP78527 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 SNORD53-201ENST00000579969 78 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AL591424.2-201ENST00000617023 128 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.31□□□□□ -2.04
PRKDCP78527 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PRKDCP78527 NCOA4P2-201ENST00000340589 1813 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 RNA5SP184-201ENST00000411071 108 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.3□□□□□ -2.04
PRKDCP78527 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC2.3□□□□□ -2.04
PRKDCP78527 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.3□□□□□ -2.04
PRKDCP78527 ASNSP1-201ENST00000518311 1939 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC2.3□□□□□ -2.04
PRKDCP78527 RNU1-108P-201ENST00000362556 161 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.3□□□□□ -2.04
PRKDCP78527 AC069285.2-201ENST00000440210 275 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 SEPT7P6-201ENST00000469999 1143 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 AC008837.1-201ENST00000511513 412 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 AL359535.1-201ENST00000612100 1087 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
PRKDCP78527 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
PRKDCP78527 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 AC073325.2-201ENST00000339545 159 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 RPL37P4-201ENST00000448908 268 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 FCF1P3-201ENST00000496394 590 ntBASIC2.3□□□□□ -2.04
PRKDCP78527 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRKDCP78527 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PRKDCP78527 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKDCP78527 FAM35BP-202ENST00000497389 3337 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC2.29□□□□□ -2.04
PRKDCP78527 AL360182.1-201ENST00000397433 468 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 FTLP19-201ENST00000433300 394 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AP000936.2-201ENST00000447151 681 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.29□□□□□ -2.04
PRKDCP78527 CKS1BP2-201ENST00000497342 240 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AP003122.3-201ENST00000526316 255 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.29□□□□□ -2.04
PRKDCP78527 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC2.29□□□□□ -2.04
PRKDCP78527 AL358913.1-201ENST00000554342 121 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
PRKDCP78527 AC078899.3-201ENST00000599065 212 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PRKDCP78527 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PRKDCP78527 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 RNA5SP39-201ENST00000411245 120 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.29□□□□□ -2.04
PRKDCP78527 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
PRKDCP78527 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
PRKDCP78527 RN7SL499P-201ENST00000481141 276 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AC114781.4-201ENST00000513707 639 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AL158827.2-201ENST00000602494 330 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AP000255.1-201ENST00000610276 676 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AL691447.3-201ENST00000635020 330 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AC069540.1-201ENST00000446320 988 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 RPS27AP9-201ENST00000477681 438 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 AC034159.1-201ENST00000513885 583 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 SCARNA20.6-201ENST00000517251 106 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 IGKV2-36-201ENST00000519999 223 ntBASIC2.29□□□□□ -2.04
PRKDCP78527 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.29□□□□□ -2.04
PRKDCP78527 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PRKDCP78527 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKDCP78527 AC016727.1-205ENST00000605437 569 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms