Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 MIR550A3-201ENST00000390735 95 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 RNU1-82P-201ENST00000390851 165 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AL590762.2-201ENST00000395798 571 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 ATP5F1P3-201ENST00000397213 657 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 LAP3P1-201ENST00000403648 294 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.76□□□□□ -1.81
CX3CL1P78423 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 TIMM9P2-201ENST00000419324 266 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.76□□□□□ -1.81
CX3CL1P78423 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AL357520.1-201ENST00000441557 453 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.76□□□□□ -1.81
CX3CL1P78423 VN1R10P-201ENST00000447106 875 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 RSL24D1P3-201ENST00000449255 495 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC108463.1-201ENST00000450258 347 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 TRGVB-201ENST00000453257 471 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AC091685.2-201ENST00000454924 864 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 ATG12P2-201ENST00000456830 416 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AL136126.1-201ENST00000473603 402 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 RN7SL826P-201ENST00000479724 288 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 RPS4XP18-201ENST00000495480 763 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 MTCYBP17-201ENST00000503579 789 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 RN7SKP276-201ENST00000516242 268 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.76□□□□□ -1.81
CX3CL1P78423 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.76□□□□□ -1.81
CX3CL1P78423 DYNLL1P4-201ENST00000549314 266 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 MIR4436B2-201ENST00000581415 91 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 MIR4436B1-201ENST00000583272 91 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AL512782.1-201ENST00000603093 364 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CL1P78423 AC006270.3-201ENST00000605967 1036 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 SNX18P1Y-201ENST00000616231 511 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.76□□□□□ -1.81
CX3CL1P78423 MIR6715B-201ENST00000637172 77 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 MTND2P41-201ENST00000637599 773 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 AC130650.2-201ENST00000618736 2403 ntBASIC3.76□□□□□ -1.81
CX3CL1P78423 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CX3CL1P78423 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.76□□□□□ -1.81
CX3CL1P78423 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CL1P78423 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CX3CL1P78423 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CX3CL1P78423 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL592148.3-201ENST00000608771 2646 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL390862.1-201ENST00000635467 1469 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 SNORA51.6-201ENST00000384151 125 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 RNU6-1122P-201ENST00000384449 107 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 RPL23AP29-201ENST00000397284 453 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 SNRPEP2-201ENST00000397592 279 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL049545.1-201ENST00000401856 572 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 ARL4AP5-201ENST00000404372 599 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL080315.1-201ENST00000406055 466 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 MIR1284-201ENST00000408337 120 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL160275.2-201ENST00000412010 394 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AL591848.1-201ENST00000413092 322 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 RPL31P2-201ENST00000413849 377 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 PTP4A1P5-201ENST00000420305 455 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AC004074.1-201ENST00000421810 1063 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AL590762.4-201ENST00000425885 253 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 BRWD1P3-201ENST00000428816 390 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 OR51AB1P-201ENST00000429046 620 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 YWHAZP7-201ENST00000436906 631 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AC092427.1-201ENST00000439177 601 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 MTCYBP11-201ENST00000447254 1109 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms