Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERVFC1P60507 Y_RNA.86-201ENST00000363020 111 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.67□□□□□ -1.5
ERVFC1P60507 Y_RNA.394-201ENST00000383942 103 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 Y_RNA.431-201ENST00000384086 102 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 Y_RNA.481-201ENST00000384373 102 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 MIR600-201ENST00000385007 98 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 RPS3AP36-201ENST00000398190 775 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AL603766.1-201ENST00000407763 664 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 RNU6-908P-201ENST00000410160 94 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AL450992.3-201ENST00000413192 568 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.67□□□□□ -1.5
ERVFC1P60507 GJA6P-201ENST00000415117 1042 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 BX295541.1-201ENST00000417774 250 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 TMBIM7P-201ENST00000418074 855 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC083875.1-201ENST00000419509 405 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC109583.1-201ENST00000432156 268 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC002486.1-201ENST00000435098 391 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 FABP3P2-201ENST00000453169 399 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC058823.1-201ENST00000485315 474 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 CEACAMP10-202ENST00000495431 496 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC048346.1-201ENST00000510247 144 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.67□□□□□ -1.5
ERVFC1P60507 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AP001284.1-201ENST00000528393 2118 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AP003122.4-201ENST00000530980 758 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC068587.4-201ENST00000533893 186 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AP002373.2-201ENST00000541631 1060 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 TRAV15-201ENST00000556680 249 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 MIR3682-201ENST00000581338 84 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.67□□□□□ -1.5
ERVFC1P60507 NRBF2P1-201ENST00000587407 859 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AP004247.3-201ENST00000608682 624 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 Z95327.3-201ENST00000610385 572 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AL158801.5-201ENST00000623123 465 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 PISRT1-201ENST00000626175 531 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
ERVFC1P60507 AC004656.1-201ENST00000568479 4951 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ERVFC1P60507 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERVFC1P60507 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ERVFC1P60507 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.67□□□□□ -1.5
ERVFC1P60507 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.67□□□□□ -1.5
ERVFC1P60507 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.67□□□□□ -1.5
ERVFC1P60507 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ERVFC1P60507 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ERVFC1P60507 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ERVFC1P60507 CASC19-260ENST00000641828 2001 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 THAP12P4-201ENST00000528321 2266 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
ERVFC1P60507 OR4F13P-202ENST00000560066 2054 ntBASIC5.67□□□□□ -1.5
ERVFC1P60507 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ERVFC1P60507 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.66□□□□□ -1.5
ERVFC1P60507 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ERVFC1P60507 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.66□□□□□ -1.5
ERVFC1P60507 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERVFC1P60507 OR4G11P-202ENST00000642116 1414 ntBASIC5.66□□□□□ -1.5
ERVFC1P60507 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERVFC1P60507 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.66□□□□□ -1.5
ERVFC1P60507 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ERVFC1P60507 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.66□□□□□ -1.5
ERVFC1P60507 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
ERVFC1P60507 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERVFC1P60507 SNORD81.2-201ENST00000365153 76 ntBASIC5.66□□□□□ -1.5
ERVFC1P60507 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.66□□□□□ -1.5
ERVFC1P60507 RPL11P3-201ENST00000395256 523 ntBASIC5.66□□□□□ -1.5
ERVFC1P60507 RPL23AP17-201ENST00000401064 499 ntBASIC5.66□□□□□ -1.5
ERVFC1P60507 HSPA8P15-201ENST00000401676 786 ntBASIC5.66□□□□□ -1.5
ERVFC1P60507 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.66□□□□□ -1.5
ERVFC1P60507 MTND3P17-201ENST00000416968 344 ntBASIC5.66□□□□□ -1.5
ERVFC1P60507 AC013429.2-201ENST00000418798 781 ntBASIC5.66□□□□□ -1.5
ERVFC1P60507 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ERVFC1P60507 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.66□□□□□ -1.5
ERVFC1P60507 MTCO2P12-201ENST00000427426 682 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms