Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP000926.4-201ENST00000527351 454 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AP003461.1-201ENST00000528866 78 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLDN20P56880 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 MTCYBP27-201ENST00000555160 670 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 RPL12P25-202ENST00000598100 674 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AL353778.1-201ENST00000603149 408 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC009220.3-201ENST00000604318 586 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC097065.2-201ENST00000608159 533 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN20P56880 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC022079.1-201ENST00000621546 602 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC073348.1-201ENST00000623002 331 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN20P56880 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN20P56880 AL592148.3-201ENST00000608771 2646 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC025125.1-201ENST00000624743 1922 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 RNU5D-1-201ENST00000363299 116 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 RNU6-444P-201ENST00000383988 108 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 MIR129-1-201ENST00000384972 72 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 MTCO3P31-201ENST00000405526 789 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 FCF1P2-201ENST00000415284 583 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 BOLA3P4-201ENST00000418151 400 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC008280.1-201ENST00000418851 412 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC009237.2-201ENST00000421358 284 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 DNAJC19P7-201ENST00000428811 344 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN20P56880 NANOGP6-201ENST00000429190 847 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 IFNNP1-201ENST00000429219 553 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC068287.1-201ENST00000430283 295 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC010881.1-201ENST00000433830 235 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC023347.2-201ENST00000433994 462 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 RPL23AP93-201ENST00000440847 484 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 MTND3P1-201ENST00000441336 220 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 H2AFZP6-201ENST00000444403 394 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 OR6K5P-201ENST00000447050 945 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN20P56880 AL162591.2-201ENST00000449634 317 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AL451050.1-201ENST00000450126 415 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 NDUFA5P7-201ENST00000452914 242 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 snoU13.1-201ENST00000459157 104 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN20P56880 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC006499.6-201ENST00000511169 607 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN20P56880 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN20P56880 MTND2P26-201ENST00000528255 1029 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN20P56880 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC090515.3-201ENST00000560431 315 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC009712.1-201ENST00000564938 316 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC084783.1-201ENST00000565846 910 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC079171.1-201ENST00000568788 914 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN20P56880 MIR4715-201ENST00000584117 79 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.11□□□□□ -1.75
CLDN20P56880 AL133243.1-201ENST00000614487 366 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC131238.1-201ENST00000617135 328 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AC131159.1-201ENST00000621854 213 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 MKKS-204ENST00000639674 192 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN20P56880 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN20P56880 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLDN20P56880 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN20P56880 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN20P56880 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN20P56880 AL133243.3-201ENST00000617415 3004 ntBASIC4.11□□□□□ -1.75
CLDN20P56880 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN20P56880 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN20P56880 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN20P56880 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN20P56880 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN20P56880 RNU6-492P-201ENST00000363035 104 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms