Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC000367.1-201ENST00000452711 1766 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC4P56524 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 IQCB2P-201ENST00000401788 1633 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC4P56524 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC008033.1-201ENST00000216407 1162 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC4P56524 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 TMSB10P2-201ENST00000416049 131 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 OR4K6P-201ENST00000416478 897 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC4P56524 ELOCP9-201ENST00000418624 239 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC009480.2-201ENST00000422916 432 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.61□□□□□ -1.67
HDAC4P56524 RPS26P40-201ENST00000435209 294 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.61□□□□□ -1.67
HDAC4P56524 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC233982.1-201ENST00000451247 436 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 DHFRP3-201ENST00000455595 559 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AK3P4-201ENST00000504283 583 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 BOLA3P3-201ENST00000505182 232 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 SLC25A15P5-201ENST00000508033 253 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 RPL7L1P13-201ENST00000511702 739 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.61□□□□□ -1.67
HDAC4P56524 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC008494.2-201ENST00000514544 370 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AP001636.2-201ENST00000525517 696 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AL352979.3-201ENST00000553515 247 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.61□□□□□ -1.67
HDAC4P56524 AL442163.2-201ENST00000553912 710 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 MIR4458-201ENST00000578872 75 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC025588.2-201ENST00000604851 466 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC016877.3-201ENST00000606778 504 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 Z98200.1-201ENST00000607298 470 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AP005137.2-201ENST00000609238 400 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AL445423.1-201ENST00000609941 536 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AL592148.2-201ENST00000612210 372 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 AP005019.3-201ENST00000620418 560 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.61□□□□□ -1.67
HDAC4P56524 AC087821.2-201ENST00000637086 450 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
HDAC4P56524 SAGE2P-201ENST00000420011 2126 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 AC095050.2-201ENST00000510748 1458 ntBASIC4.61□□□□□ -1.67
HDAC4P56524 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HDAC4P56524 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC4P56524 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.6□□□□□ -1.67
HDAC4P56524 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 SNORD116.1-201ENST00000365628 92 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 RNU6-1279P-201ENST00000383917 103 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.6□□□□□ -1.67
HDAC4P56524 ERHP2-201ENST00000402323 299 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AL078604.1-201ENST00000404609 466 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 OR51A3P-201ENST00000413596 924 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC004022.2-201ENST00000413824 193 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC114495.1-201ENST00000441274 436 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.6□□□□□ -1.67
HDAC4P56524 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 MRPL42P4-201ENST00000453267 443 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.6□□□□□ -1.67
HDAC4P56524 VN1R40P-201ENST00000455196 941 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms