Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC010680.3-201ENST00000604215 520 ntBASIC4.92□□□□□ -1.62
COPAP53621 AL022161.1-201ENST00000604390 213 ntBASIC4.92□□□□□ -1.62
COPAP53621 AL592221.1-201ENST00000605266 382 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC010424.2-201ENST00000607594 443 ntBASIC4.92□□□□□ -1.62
COPAP53621 AL354976.1-201ENST00000613843 387 ntBASIC4.92□□□□□ -1.62
COPAP53621 MIR6853-201ENST00000619642 74 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.92□□□□□ -1.62
COPAP53621 AC079248.2-201ENST00000623779 326 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC026634.1-201ENST00000634369 198 ntBASIC4.92□□□□□ -1.62
COPAP53621 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 DHX9P1-201ENST00000436565 3076 ntBASIC4.92□□□□□ -1.62
COPAP53621 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.92□□□□□ -1.62
COPAP53621 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
COPAP53621 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 XPOTP1-201ENST00000443317 2398 ntBASIC4.91□□□□□ -1.62
COPAP53621 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.91□□□□□ -1.62
COPAP53621 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 RNA5SP332-201ENST00000391063 115 ntBASIC4.91□□□□□ -1.62
COPAP53621 AL121978.1-201ENST00000402778 359 ntBASIC4.91□□□□□ -1.62
COPAP53621 AL078604.1-201ENST00000404609 466 ntBASIC4.91□□□□□ -1.62
COPAP53621 RAB28P1-201ENST00000411517 641 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 AC114755.2-201ENST00000413520 361 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.91□□□□□ -1.62
COPAP53621 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 AC092634.6-201ENST00000418558 192 ntBASIC4.91□□□□□ -1.62
COPAP53621 MORF4L1P6-201ENST00000418771 268 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC009237.2-201ENST00000421358 284 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 RPL31P54-201ENST00000429803 370 ntBASIC4.91□□□□□ -1.62
COPAP53621 CEACAMP1-201ENST00000434624 1035 ntBASIC4.91□□□□□ -1.62
COPAP53621 YWHAZP8-201ENST00000436935 731 ntBASIC4.91□□□□□ -1.62
COPAP53621 AL445567.1-201ENST00000439121 144 ntBASIC4.91□□□□□ -1.62
COPAP53621 ARL4AP3-201ENST00000441452 574 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 MTND1P29-201ENST00000448112 647 ntBASIC4.91□□□□□ -1.62
COPAP53621 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 HMGN3P1-201ENST00000453847 193 ntBASIC4.91□□□□□ -1.62
COPAP53621 BZW1P2-201ENST00000473537 826 ntBASIC4.91□□□□□ -1.62
COPAP53621 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.91□□□□□ -1.62
COPAP53621 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 PRELID3BP7-201ENST00000503606 469 ntBASIC4.91□□□□□ -1.62
COPAP53621 XKRY-201ENST00000510392 1100 ntBASIC4.91□□□□□ -1.62
COPAP53621 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.91□□□□□ -1.62
COPAP53621 RN7SKP82-201ENST00000516786 223 ntBASIC4.91□□□□□ -1.62
COPAP53621 RNU6-1261P-201ENST00000517194 104 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 UBE2NP1-201ENST00000545592 458 ntBASIC4.91□□□□□ -1.62
COPAP53621 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.91□□□□□ -1.62
COPAP53621 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 MTCYBP33-201ENST00000575007 1130 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC090616.2-202ENST00000584248 222 ntBASIC4.91□□□□□ -1.62
COPAP53621 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.91□□□□□ -1.62
COPAP53621 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.91□□□□□ -1.62
COPAP53621 AC104687.2-201ENST00000604442 342 ntBASIC4.91□□□□□ -1.62
COPAP53621 AL163642.2-201ENST00000604722 1019 ntBASIC4.91□□□□□ -1.62
COPAP53621 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 AL022401.1-201ENST00000619498 108 ntBASIC4.91□□□□□ -1.62
COPAP53621 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 AP000526.1-201ENST00000603308 1388 ntBASIC4.91□□□□□ -1.62
COPAP53621 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COPAP53621 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COPAP53621 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COPAP53621 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
COPAP53621 CDR1-202ENST00000625883 1485 ntBASIC4.9□□□□□ -1.62
COPAP53621 RNA5SP391-201ENST00000363456 119 ntBASIC4.9□□□□□ -1.63
COPAP53621 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.9□□□□□ -1.63
COPAP53621 LUZP4P1-201ENST00000415420 344 ntBASIC4.9□□□□□ -1.63
COPAP53621 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.9□□□□□ -1.63
COPAP53621 AC008280.1-201ENST00000418851 412 ntBASIC4.9□□□□□ -1.63
COPAP53621 DNAJC19P7-201ENST00000428811 344 ntBASIC4.9□□□□□ -1.63
COPAP53621 IFNNP1-201ENST00000429219 553 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC068287.1-201ENST00000430283 295 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC016712.1-201ENST00000431088 378 ntBASIC4.9□□□□□ -1.63
COPAP53621 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.9□□□□□ -1.63
COPAP53621 NMNAT1P2-201ENST00000435192 860 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.9□□□□□ -1.63
COPAP53621 AC241584.1-201ENST00000438469 1241 ntBASIC4.9□□□□□ -1.63
COPAP53621 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COPAP53621 RPS5P7-201ENST00000456664 608 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.9□□□□□ -1.63
COPAP53621 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COPAP53621 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.9□□□□□ -1.63
COPAP53621 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.9□□□□□ -1.63
COPAP53621 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.9□□□□□ -1.63
COPAP53621 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.9□□□□□ -1.63
COPAP53621 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.9□□□□□ -1.63
COPAP53621 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms