Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AP001317.1-201ENST00000531194 960 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 AC124068.1-201ENST00000563131 678 ntBASIC4.86□□□□□ -1.63
COPB1P53618 UBE2FP2-201ENST00000566646 462 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.86□□□□□ -1.63
COPB1P53618 AC079171.1-201ENST00000568788 914 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 AC091042.1-201ENST00000579213 173 ntBASIC4.86□□□□□ -1.63
COPB1P53618 MIR4270-201ENST00000581799 70 ntBASIC4.86□□□□□ -1.63
COPB1P53618 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.86□□□□□ -1.63
COPB1P53618 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 AL590229.1-201ENST00000603497 542 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC020634.1-201ENST00000608701 549 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC055764.2-201ENST00000610089 670 ntBASIC4.86□□□□□ -1.63
COPB1P53618 Z69908.1-201ENST00000622603 247 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC091931.1-201ENST00000623488 728 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.86□□□□□ -1.63
COPB1P53618 AC006065.6-201ENST00000625201 545 ntBASIC4.86□□□□□ -1.63
COPB1P53618 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.86□□□□□ -1.63
COPB1P53618 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.86□□□□□ -1.63
COPB1P53618 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
COPB1P53618 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 RN7SKP224-201ENST00000364140 325 ntBASIC4.85□□□□□ -1.63
COPB1P53618 RNU6-619P-201ENST00000365146 108 ntBASIC4.85□□□□□ -1.63
COPB1P53618 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COPB1P53618 Y_RNA.505-201ENST00000384489 102 ntBASIC4.85□□□□□ -1.63
COPB1P53618 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COPB1P53618 SNORA68.2-201ENST00000391263 128 ntBASIC4.85□□□□□ -1.63
COPB1P53618 RPS3AP26-201ENST00000398259 784 ntBASIC4.85□□□□□ -1.63
COPB1P53618 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 RPS20P14-201ENST00000412545 360 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC008072.1-201ENST00000434254 824 ntBASIC4.85□□□□□ -1.63
COPB1P53618 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 AL138878.2-201ENST00000440581 1241 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC009961.3-201ENST00000449832 765 ntBASIC4.85□□□□□ -1.63
COPB1P53618 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 RPL7P18-201ENST00000478965 734 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AC011005.3-201ENST00000491624 395 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 OR7H2P-201ENST00000513483 306 ntBASIC4.85□□□□□ -1.63
COPB1P53618 RNA5SP497-201ENST00000516081 97 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 HMGB1P23-201ENST00000518743 568 ntBASIC4.85□□□□□ -1.63
COPB1P53618 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC005832.3-201ENST00000537929 631 ntBASIC4.85□□□□□ -1.63
COPB1P53618 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.85□□□□□ -1.63
COPB1P53618 UBE2NP1-201ENST00000545592 458 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 MIR3915-201ENST00000578518 97 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC022884.3-201ENST00000579571 248 ntBASIC4.85□□□□□ -1.63
COPB1P53618 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 MIR4697-201ENST00000582977 78 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 VN1R82P-201ENST00000601481 356 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AP001981.2-201ENST00000603241 418 ntBASIC4.85□□□□□ -1.63
COPB1P53618 DUXAP11-201ENST00000603858 526 ntBASIC4.85□□□□□ -1.63
COPB1P53618 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AC004223.4-201ENST00000612426 332 ntBASIC4.85□□□□□ -1.63
COPB1P53618 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.85□□□□□ -1.63
COPB1P53618 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.85□□□□□ -1.63
COPB1P53618 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.85□□□□□ -1.63
COPB1P53618 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 AC025263.3-201ENST00000622965 1396 ntBASIC4.85□□□□□ -1.63
COPB1P53618 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPB1P53618 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
COPB1P53618 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
COPB1P53618 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
COPB1P53618 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms