Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC092685.1-201ENST00000447960 1243 ntBASIC3.96□□□□□ -1.78
CASP4P49662 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.96□□□□□ -1.78
CASP4P49662 NPM1P17-201ENST00000479221 602 ntBASIC3.96□□□□□ -1.78
CASP4P49662 FTH1P9-201ENST00000513251 355 ntBASIC3.96□□□□□ -1.78
CASP4P49662 SNORA26.10-201ENST00000516427 141 ntBASIC3.96□□□□□ -1.78
CASP4P49662 SNORA31.13-201ENST00000516624 135 ntBASIC3.96□□□□□ -1.78
CASP4P49662 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.96□□□□□ -1.78
CASP4P49662 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.96□□□□□ -1.78
CASP4P49662 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.96□□□□□ -1.78
CASP4P49662 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.96□□□□□ -1.78
CASP4P49662 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.96□□□□□ -1.78
CASP4P49662 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 AL020997.2-201ENST00000602607 184 ntBASIC3.96□□□□□ -1.78
CASP4P49662 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.96□□□□□ -1.78
CASP4P49662 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.96□□□□□ -1.78
CASP4P49662 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.96□□□□□ -1.78
CASP4P49662 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.96□□□□□ -1.78
CASP4P49662 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.96□□□□□ -1.78
CASP4P49662 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 AL031985.3-201ENST00000565390 2449 ntBASIC3.96□□□□□ -1.78
CASP4P49662 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.96□□□□□ -1.78
CASP4P49662 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.96□□□□□ -1.78
CASP4P49662 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 AC007823.1-201ENST00000569932 1566 ntBASIC3.96□□□□□ -1.78
CASP4P49662 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CASP4P49662 ZNF90P1-201ENST00000480493 1951 ntBASIC3.96□□□□□ -1.78
CASP4P49662 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.96□□□□□ -1.78
CASP4P49662 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.96□□□□□ -1.78
CASP4P49662 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 ZNF285B-201ENST00000561698 1767 ntBASIC3.95□□□□□ -1.78
CASP4P49662 METTL21EP-201ENST00000298105 713 ntBASIC3.95□□□□□ -1.78
CASP4P49662 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.95□□□□□ -1.78
CASP4P49662 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CASP4P49662 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.95□□□□□ -1.78
CASP4P49662 AL035423.1-201ENST00000420331 213 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AC093698.1-201ENST00000423843 571 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AL031736.2-201ENST00000426573 787 ntBASIC3.95□□□□□ -1.78
CASP4P49662 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.95□□□□□ -1.78
CASP4P49662 AL359073.1-201ENST00000448036 403 ntBASIC3.95□□□□□ -1.78
CASP4P49662 MTCO3P20-201ENST00000454926 688 ntBASIC3.95□□□□□ -1.78
CASP4P49662 RPL37P3-201ENST00000456825 293 ntBASIC3.95□□□□□ -1.78
CASP4P49662 CABYRP1-201ENST00000465493 1045 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AC084357.1-201ENST00000473404 255 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AC106872.2-201ENST00000494303 480 ntBASIC3.95□□□□□ -1.78
CASP4P49662 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
CASP4P49662 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.95□□□□□ -1.78
CASP4P49662 SNORA70.18-201ENST00000516696 98 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AC023632.4-201ENST00000517783 191 ntBASIC3.95□□□□□ -1.78
CASP4P49662 IGKV2-36-201ENST00000519999 223 ntBASIC3.95□□□□□ -1.78
CASP4P49662 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.95□□□□□ -1.78
CASP4P49662 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.95□□□□□ -1.78
CASP4P49662 HAUS1P3-201ENST00000523909 662 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.95□□□□□ -1.78
CASP4P49662 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.95□□□□□ -1.78
CASP4P49662 OR4U1P-201ENST00000554958 912 ntBASIC3.95□□□□□ -1.78
CASP4P49662 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.95□□□□□ -1.78
CASP4P49662 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.95□□□□□ -1.78
CASP4P49662 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.95□□□□□ -1.78
CASP4P49662 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.95□□□□□ -1.78
CASP4P49662 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.95□□□□□ -1.78
CASP4P49662 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.95□□□□□ -1.78
CASP4P49662 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.95□□□□□ -1.78
CASP4P49662 AL713922.2-201ENST00000619384 716 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AC039056.2-201ENST00000622261 511 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AL732618.1-201ENST00000623251 301 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AL356863.1-201ENST00000623378 1080 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AC244205.2-202ENST00000635781 342 ntBASIC3.95□□□□□ -1.78
CASP4P49662 AL732372.2-225ENST00000642124 456 ntBASIC3.95□□□□□ -1.78
CASP4P49662 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.95□□□□□ -1.78
CASP4P49662 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASP4P49662 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.94□□□□□ -1.78
CASP4P49662 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.94□□□□□ -1.78
CASP4P49662 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CASP4P49662 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CASP4P49662 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CASP4P49662 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CASP4P49662 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CASP4P49662 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CASP4P49662 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CASP4P49662 RNU1-87P-201ENST00000363727 170 ntBASIC3.94□□□□□ -1.78
CASP4P49662 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CASP4P49662 TAF9BP2-201ENST00000400856 499 ntBASIC3.94□□□□□ -1.78
CASP4P49662 AL445189.1-201ENST00000405722 338 ntBASIC3.94□□□□□ -1.78
CASP4P49662 RNU2-17P-201ENST00000410290 190 ntBASIC3.94□□□□□ -1.78
CASP4P49662 RAB9AP3-201ENST00000412737 573 ntBASIC3.94□□□□□ -1.78
CASP4P49662 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.94□□□□□ -1.78
CASP4P49662 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.94□□□□□ -1.78
CASP4P49662 AC017079.2-201ENST00000416102 485 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms