Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RNU6-709P-201ENST00000517257 104 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC008694.2-201ENST00000517591 306 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXA1P49639 IFITM8P-201ENST00000522529 394 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AP001189.2-201ENST00000527320 189 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXA1P49639 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXA1P49639 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXA1P49639 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA1P49639 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXA1P49639 TRAV15-201ENST00000556680 249 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC018552.3-201ENST00000567416 561 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC011260.1-201ENST00000578420 472 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 MIR3915-201ENST00000578518 97 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 SNORD95-201ENST00000579879 68 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 OR4K7P-201ENST00000580232 945 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 FKBP1AP1-201ENST00000594588 318 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 COX6CP4-201ENST00000605798 228 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AL354760.1-201ENST00000608357 643 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA1P49639 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA1P49639 AC122133.1-201ENST00000613964 233 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA1P49639 HSPA8P1-201ENST00000425843 1833 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC008758.3-201ENST00000507003 1829 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA1P49639 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA1P49639 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA1P49639 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HOXA1P49639 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 XIAPP3-201ENST00000312918 795 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 RNA5SP242-201ENST00000364171 118 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 Y_RNA.311-201ENST00000365068 96 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HOXA1P49639 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HOXA1P49639 SNORA51.12-201ENST00000384448 134 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 GLULP6-201ENST00000399502 913 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA1P49639 AP000534.2-201ENST00000412729 568 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 JKAMPP1-201ENST00000413804 919 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA1P49639 AC092634.6-201ENST00000418558 192 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 RPP40P1-201ENST00000426762 456 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AL589823.1-201ENST00000429577 183 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 RPL37P1-201ENST00000432310 284 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA1P49639 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA1P49639 ISCA1P2-201ENST00000438679 421 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 ACTR3P2-201ENST00000439585 1257 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA1P49639 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA1P49639 AL137845.2-201ENST00000444292 988 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 KNOP1P3-201ENST00000446933 426 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA1P49639 OR6C5P-201ENST00000452388 923 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA1P49639 HMGN2P25-201ENST00000486956 268 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 ACTG1P13-201ENST00000486987 1043 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA1P49639 OR4G11P-201ENST00000492842 939 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 RN7SL244P-201ENST00000493405 297 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC108022.1-201ENST00000493466 478 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC025674.1-201ENST00000507074 324 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA1P49639 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA1P49639 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA1P49639 IGKV2-18-201ENST00000522607 343 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HOXA1P49639 OR5AZ1P-201ENST00000527448 943 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC005951.1-201ENST00000576706 485 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 ISCA1P3-201ENST00000577104 373 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA1P49639 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA1P49639 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 AL390838.2-201ENST00000602394 274 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC009220.3-201ENST00000604318 586 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC105129.3-201ENST00000605455 485 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC126915.2-201ENST00000610957 190 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HOXA1P49639 AC073530.2-201ENST00000623987 261 ntBASIC3.89□□□□□ -1.79
HOXA1P49639 AC005539.1-201ENST00000443768 1479 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms