Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AADACP1-206ENST00000561502 1193 ntBASIC3.76□□□□□ -1.81
CDX1P47902 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 AC022726.1-201ENST00000587475 207 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AC005255.1-201ENST00000593748 216 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AC020914.4-201ENST00000597690 277 ntBASIC3.76□□□□□ -1.81
CDX1P47902 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.76□□□□□ -1.81
CDX1P47902 AC091946.2-201ENST00000606105 291 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AC007390.2-201ENST00000606229 3803 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AC009974.1-201ENST00000608881 455 ntBASIC3.76□□□□□ -1.81
CDX1P47902 MIR6820-201ENST00000611508 62 ntBASIC3.76□□□□□ -1.81
CDX1P47902 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.76□□□□□ -1.81
CDX1P47902 AC130650.2-201ENST00000618736 2403 ntBASIC3.76□□□□□ -1.81
CDX1P47902 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.76□□□□□ -1.81
CDX1P47902 MAPK10-253ENST00000641010 4072 ntBASIC3.76□□□□□ -1.81
CDX1P47902 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CDX1P47902 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CDX1P47902 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 AC107982.1-201ENST00000507171 1300 ntBASIC3.75□□□□□ -1.81
CDX1P47902 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 AC018555.1-201ENST00000567548 1980 ntBASIC3.75□□□□□ -1.81
CDX1P47902 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDX1P47902 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 RNU5D-1-201ENST00000363299 116 ntBASIC3.75□□□□□ -1.81
CDX1P47902 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDX1P47902 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 RNU6-657P-201ENST00000383904 107 ntBASIC3.75□□□□□ -1.81
CDX1P47902 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDX1P47902 AL357515.1-201ENST00000402967 542 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AL080315.1-201ENST00000406055 466 ntBASIC3.75□□□□□ -1.81
CDX1P47902 U3.35-201ENST00000408405 208 ntBASIC3.75□□□□□ -1.81
CDX1P47902 RN7SKP177-201ENST00000410567 355 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AMD1P2-201ENST00000412936 992 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 MTCYBP24-201ENST00000420387 1106 ntBASIC3.75□□□□□ -1.81
CDX1P47902 RPL7P44-201ENST00000424827 742 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AL035410.1-201ENST00000427409 427 ntBASIC3.75□□□□□ -1.81
CDX1P47902 FTH1P6-201ENST00000430768 320 ntBASIC3.75□□□□□ -1.81
CDX1P47902 ELOCP18-201ENST00000434209 337 ntBASIC3.75□□□□□ -1.81
CDX1P47902 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 AL451139.1-201ENST00000434718 346 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AL138878.2-201ENST00000440581 1241 ntBASIC3.75□□□□□ -1.81
CDX1P47902 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.75□□□□□ -1.81
CDX1P47902 AL513533.1-201ENST00000453728 415 ntBASIC3.75□□□□□ -1.81
CDX1P47902 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 AC011979.1-201ENST00000472300 483 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.75□□□□□ -1.81
CDX1P47902 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.75□□□□□ -1.81
CDX1P47902 TMEM248P1-201ENST00000510579 951 ntBASIC3.75□□□□□ -1.81
CDX1P47902 OR7H2P-201ENST00000513483 306 ntBASIC3.75□□□□□ -1.81
CDX1P47902 RNU1-6P-201ENST00000516290 144 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.75□□□□□ -1.81
CDX1P47902 IFITM8P-201ENST00000522529 394 ntBASIC3.75□□□□□ -1.81
CDX1P47902 OR8G5-201ENST00000524943 1041 ntBASIC3.75□□□□□ -1.81
CDX1P47902 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 AP001880.2-201ENST00000538233 448 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 CR383656.6-201ENST00000550518 394 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.75□□□□□ -1.81
CDX1P47902 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.75□□□□□ -1.81
CDX1P47902 AC023813.2-201ENST00000564321 469 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.75□□□□□ -1.81
CDX1P47902 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.75□□□□□ -1.81
CDX1P47902 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 AP001160.4-201ENST00000596971 382 ntBASIC3.75□□□□□ -1.81
CDX1P47902 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 AC113368.1-201ENST00000603736 382 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AL159169.3-201ENST00000608871 561 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.75□□□□□ -1.81
CDX1P47902 AL136295.6-201ENST00000610486 658 ntBASIC3.75□□□□□ -1.81
CDX1P47902 FAM27B-201ENST00000610601 213 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AL354976.1-201ENST00000613843 387 ntBASIC3.75□□□□□ -1.81
CDX1P47902 MIR6780A-201ENST00000615089 68 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC004825.2-201ENST00000616634 455 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC073348.1-201ENST00000623002 331 ntBASIC3.75□□□□□ -1.81
CDX1P47902 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDX1P47902 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.75□□□□□ -1.81
CDX1P47902 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.75□□□□□ -1.81
CDX1P47902 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.75□□□□□ -1.81
CDX1P47902 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.75□□□□□ -1.81
CDX1P47902 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms