Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCC3P46736 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BRCC3P46736 AC139783.2-201ENST00000504847 1145 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCC3P46736 AC010285.3-201ENST00000511668 676 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 AC112198.4-201ENST00000515450 351 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 RNA5SP164-201ENST00000516533 110 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BRCC3P46736 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.03□□□□□ -1.76
BRCC3P46736 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.03□□□□□ -1.76
BRCC3P46736 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCC3P46736 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCC3P46736 ZNF92P3-201ENST00000596594 954 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 AC025946.2-201ENST00000603398 234 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 AC128687.2-201ENST00000609657 566 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BRCC3P46736 MAPK10-253ENST00000641010 4072 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCC3P46736 AL592494.2-201ENST00000425455 1548 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRCC3P46736 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCC3P46736 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCC3P46736 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 AL161912.2-201ENST00000565707 3007 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
BRCC3P46736 MIR208A-201ENST00000362287 71 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 RNA5SP119-201ENST00000362715 117 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BRCC3P46736 HMGB1P13-201ENST00000406019 642 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 TATDN1P1-201ENST00000414123 891 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.02□□□□□ -1.77
BRCC3P46736 MTCO3P4-201ENST00000419236 787 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.02□□□□□ -1.77
BRCC3P46736 RPS6P14-201ENST00000425165 719 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AC011742.1-201ENST00000431448 434 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 YWHAEP5-201ENST00000431545 765 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.02□□□□□ -1.77
BRCC3P46736 ELOCP8-201ENST00000439309 332 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 TPTE2P3-201ENST00000441562 1189 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 ELOCP15-201ENST00000442090 332 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 SETD6P1-201ENST00000444575 317 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AC092685.1-201ENST00000447960 1243 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 HMGN1P5-201ENST00000448591 263 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 RPL7L1P8-201ENST00000469911 741 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 AC108941.1-201ENST00000502853 530 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.02□□□□□ -1.77
BRCC3P46736 RNU6-334P-201ENST00000517072 102 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
BRCC3P46736 CIR1P1-201ENST00000524055 1133 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AC090877.1-201ENST00000561418 344 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 MIR3922-201ENST00000585192 84 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.02□□□□□ -1.77
BRCC3P46736 AC079880.2-201ENST00000603790 1213 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AC069200.1-201ENST00000609511 323 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.02□□□□□ -1.77
BRCC3P46736 MIR8084-201ENST00000614105 89 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AC009318.3-201ENST00000616916 503 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.02□□□□□ -1.77
BRCC3P46736 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.02□□□□□ -1.77
BRCC3P46736 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.02□□□□□ -1.77
BRCC3P46736 AC106871.1-201ENST00000568324 3102 ntBASIC4.02□□□□□ -1.77
BRCC3P46736 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
BRCC3P46736 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
BRCC3P46736 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCC3P46736 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCC3P46736 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCC3P46736 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCC3P46736 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
BRCC3P46736 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
BRCC3P46736 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.01□□□□□ -1.77
BRCC3P46736 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCC3P46736 LINC02471-203ENST00000641941 4752 ntBASIC4.01□□□□□ -1.77
BRCC3P46736 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCC3P46736 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.01□□□□□ -1.77
BRCC3P46736 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCC3P46736 RNU6-609P-201ENST00000365459 107 ntBASIC4.01□□□□□ -1.77
BRCC3P46736 AL445183.3-201ENST00000414168 502 ntBASIC4.01□□□□□ -1.77
BRCC3P46736 AC068533.1-201ENST00000418542 415 ntBASIC4.01□□□□□ -1.77
BRCC3P46736 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.01□□□□□ -1.77
BRCC3P46736 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRCC3P46736 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.01□□□□□ -1.77
BRCC3P46736 VN1R42P-201ENST00000424651 344 ntBASIC4.01□□□□□ -1.77
BRCC3P46736 AC009965.2-201ENST00000425328 970 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms