Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-1P43699 OR10G5P-201ENST00000532733 358 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 OR8L1P-201ENST00000534005 955 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AC007834.2-201ENST00000536310 343 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 GCSHP4-201ENST00000538792 439 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC092490.3-201ENST00000545370 572 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AL389895.1-201ENST00000554127 252 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 DUXAP1-201ENST00000556632 463 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 TRAV15-201ENST00000556680 249 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AGGF1P8-201ENST00000562979 1000 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC107982.3-201ENST00000584957 985 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC022726.1-201ENST00000587475 207 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC009220.3-201ENST00000604318 586 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 HSPE1P14-201ENST00000605812 302 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AP003392.5-201ENST00000607857 415 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AL451074.6-201ENST00000608512 729 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AP001521.2-201ENST00000608772 546 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC004948.1-201ENST00000609858 672 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AL121612.2-201ENST00000612261 482 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 MIR6826-201ENST00000617808 98 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 MIR6729-201ENST00000618194 65 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC067852.7-201ENST00000623270 535 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-1P43699 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AC016588.2-201ENST00000632484 3021 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AL590763.1-201ENST00000398297 1545 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 PABPC1P7-201ENST00000413177 1513 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-1P43699 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-1P43699 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 CDR1-202ENST00000625883 1485 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-1P43699 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-1P43699 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-1P43699 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NKX2-1P43699 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 RNU1-15P-201ENST00000353977 144 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 RNU6-216P-201ENST00000363282 104 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 RNA5SP151-201ENST00000365632 117 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AL023807.1-201ENST00000407932 359 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 RPL23AP47-201ENST00000408017 460 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 MIR1250-201ENST00000408098 113 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 RN7SKP167-201ENST00000411047 285 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 NRBF2P2-201ENST00000413087 861 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AL645608.4-201ENST00000423619 154 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 VDAC1P6-201ENST00000430062 855 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AC079168.2-201ENST00000453977 416 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 ATG12P2-201ENST00000456830 416 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-1P43699 RPS18P6-201ENST00000476880 458 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-1P43699 GAPDHP36-201ENST00000480688 918 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AC013828.1-201ENST00000481845 158 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC091951.3-201ENST00000504093 246 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC105313.1-201ENST00000509121 353 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-1P43699 DEFB109D-201ENST00000529497 240 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-1P43699 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AL132657.2-201ENST00000564417 358 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 MIR4489-201ENST00000578869 62 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 OR4K7P-201ENST00000580232 945 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 MIR1269B-201ENST00000580405 75 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-1P43699 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms