Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC113420.1-201ENST00000507903 571 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.47□□□□□ -1.69
HADHAP40939 AC104057.1-201ENST00000515547 497 ntBASIC4.47□□□□□ -1.69
HADHAP40939 RN7SKP277-201ENST00000516895 283 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC034205.1-201ENST00000520621 638 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.47□□□□□ -1.69
HADHAP40939 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.47□□□□□ -1.69
HADHAP40939 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.47□□□□□ -1.69
HADHAP40939 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.47□□□□□ -1.69
HADHAP40939 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.47□□□□□ -1.69
HADHAP40939 AC008782.1-201ENST00000603386 430 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AL160237.3-201ENST00000604114 1013 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC069545.1-201ENST00000605671 358 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AL121895.2-201ENST00000619558 447 ntBASIC4.47□□□□□ -1.69
HADHAP40939 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.47□□□□□ -1.69
HADHAP40939 AC026634.1-201ENST00000634369 198 ntBASIC4.47□□□□□ -1.69
HADHAP40939 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.46□□□□□ -1.69
HADHAP40939 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.46□□□□□ -1.69
HADHAP40939 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HADHAP40939 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HADHAP40939 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 ENSAP1-201ENST00000392855 326 ntBASIC4.46□□□□□ -1.7
HADHAP40939 COX6CP17-201ENST00000421389 185 ntBASIC4.46□□□□□ -1.7
HADHAP40939 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 COX6CP15-201ENST00000426313 211 ntBASIC4.46□□□□□ -1.7
HADHAP40939 RAC1P8-201ENST00000427086 527 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC114973.1-201ENST00000429057 632 ntBASIC4.46□□□□□ -1.7
HADHAP40939 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 USP9YP24-201ENST00000434374 697 ntBASIC4.46□□□□□ -1.7
HADHAP40939 USP9YP22-201ENST00000438971 294 ntBASIC4.46□□□□□ -1.7
HADHAP40939 USP9YP17-201ENST00000444617 696 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 TPT1P12-201ENST00000448968 492 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 BX276092.4-201ENST00000452056 248 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 AC010469.1-201ENST00000463864 576 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC146507.1-201ENST00000468335 354 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 VWA8P1-201ENST00000510889 176 ntBASIC4.46□□□□□ -1.7
HADHAP40939 RNU6-885P-201ENST00000516607 104 ntBASIC4.46□□□□□ -1.7
HADHAP40939 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.46□□□□□ -1.7
HADHAP40939 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 AC084783.1-201ENST00000565846 910 ntBASIC4.46□□□□□ -1.7
HADHAP40939 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.46□□□□□ -1.7
HADHAP40939 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 AL391001.1-201ENST00000602747 715 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC007566.2-201ENST00000603642 413 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC068722.2-201ENST00000618734 544 ntBASIC4.46□□□□□ -1.7
HADHAP40939 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.46□□□□□ -1.7
HADHAP40939 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HADHAP40939 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HADHAP40939 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HADHAP40939 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 AL356489.2-201ENST00000566968 3528 ntBASIC4.45□□□□□ -1.7
HADHAP40939 NMD3P1-201ENST00000439704 1488 ntBASIC4.45□□□□□ -1.7
HADHAP40939 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HADHAP40939 SNORD116-12-201ENST00000384468 92 ntBASIC4.45□□□□□ -1.7
HADHAP40939 MIR659-201ENST00000384963 97 ntBASIC4.45□□□□□ -1.7
HADHAP40939 MIR129-1-201ENST00000384972 72 ntBASIC4.45□□□□□ -1.7
HADHAP40939 SSXP10-201ENST00000402595 565 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AL136310.1-201ENST00000404926 654 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AL133264.1-201ENST00000407157 562 ntBASIC4.45□□□□□ -1.7
HADHAP40939 OR4K6P-201ENST00000416478 897 ntBASIC4.45□□□□□ -1.7
HADHAP40939 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 MTCO2P23-201ENST00000425216 680 ntBASIC4.45□□□□□ -1.7
HADHAP40939 RPL36P19-201ENST00000430744 301 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AC016712.1-201ENST00000431088 378 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AL132765.1-201ENST00000434165 553 ntBASIC4.45□□□□□ -1.7
HADHAP40939 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.45□□□□□ -1.7
HADHAP40939 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.45□□□□□ -1.7
HADHAP40939 RPS27AP17-201ENST00000463344 455 ntBASIC4.45□□□□□ -1.7
HADHAP40939 RN7SL812P-201ENST00000493791 279 ntBASIC4.45□□□□□ -1.7
HADHAP40939 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.45□□□□□ -1.7
HADHAP40939 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms