Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CLCN1P35523 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.22□□□□□ -1.25
CLCN1P35523 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CLCN1P35523 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 AC010168.2-201ENST00000562691 5428 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
CLCN1P35523 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CLCN1P35523 AL139135.1-201ENST00000412675 209 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AL590609.2-201ENST00000421430 368 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AL590128.1-201ENST00000433407 286 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AL359265.2-201ENST00000434367 631 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 MTCO3P10-201ENST00000455912 772 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 RNU6-1218P-201ENST00000458990 108 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 MIR2053-201ENST00000459295 91 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.22□□□□□ -1.25
CLCN1P35523 AC093853.1-201ENST00000515689 483 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AC138517.1-201ENST00000515724 568 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 RNU6-976P-201ENST00000516086 111 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 RNU6-264P-201ENST00000517134 104 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 RNA5SP454-201ENST00000517231 127 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AP004607.5-201ENST00000532034 217 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 COX6CP3-201ENST00000580869 223 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.22□□□□□ -1.25
CLCN1P35523 AC008782.1-201ENST00000603386 430 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 AP000843.1-201ENST00000624880 701 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 AL731532.1-201ENST00000623972 4236 ntBASIC7.22□□□□□ -1.25
CLCN1P35523 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.22□□□□□ -1.25
CLCN1P35523 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
CLCN1P35523 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CLCN1P35523 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CLCN1P35523 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CLCN1P35523 AC092692.1-201ENST00000623625 2595 ntBASIC7.21□□□□□ -1.25
CLCN1P35523 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CLCN1P35523 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CLCN1P35523 AL049641.1-201ENST00000441055 1948 ntBASIC7.21□□□□□ -1.25
CLCN1P35523 AC091046.3-201ENST00000631455 1574 ntBASIC7.21□□□□□ -1.25
CLCN1P35523 ZNF806-201ENST00000438300 1774 ntBASIC7.21□□□□□ -1.25
CLCN1P35523 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CLCN1P35523 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CLCN1P35523 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC7.21□□□□□ -1.26
CLCN1P35523 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CLCN1P35523 Y_RNA.158-201ENST00000363651 101 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 MIR19A-201ENST00000384878 82 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 RNU6-278P-201ENST00000390945 109 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CLCN1P35523 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC7.21□□□□□ -1.26
CLCN1P35523 CYP4F30P-202ENST00000420048 405 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC234779.1-201ENST00000425910 285 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AL160004.2-201ENST00000432935 350 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.21□□□□□ -1.26
CLCN1P35523 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.21□□□□□ -1.26
CLCN1P35523 Z98949.2-201ENST00000440996 144 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.21□□□□□ -1.26
CLCN1P35523 AL035666.1-201ENST00000446195 348 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC016724.1-201ENST00000453215 421 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.21□□□□□ -1.26
CLCN1P35523 AL162395.1-201ENST00000457882 422 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC079168.1-201ENST00000458741 345 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC012123.2-201ENST00000485809 248 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.21□□□□□ -1.26
CLCN1P35523 RPS27P27-201ENST00000498779 255 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC008945.1-201ENST00000505144 499 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.21□□□□□ -1.26
CLCN1P35523 RNU6-347P-201ENST00000516658 105 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC078899.1-201ENST00000521432 1185 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.21□□□□□ -1.26
CLCN1P35523 AC018442.3-201ENST00000523025 183 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 PHBP2-201ENST00000532859 806 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.21□□□□□ -1.26
CLCN1P35523 AC126323.4-201ENST00000566935 234 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC106785.4-201ENST00000569492 412 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.21□□□□□ -1.26
CLCN1P35523 AL390240.1-201ENST00000612950 384 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AL157817.1-201ENST00000614264 790 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC006453.3-201ENST00000635891 377 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 AC140479.4-205ENST00000636339 820 ntBASIC7.21□□□□□ -1.26
CLCN1P35523 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CLCN1P35523 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CLCN1P35523 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.21□□□□□ -1.26
CLCN1P35523 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms