Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 AC134882.1-201ENST00000603738 1676 ntBASIC3.53□□□□□ -1.84
RPA3P35244 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
RPA3P35244 AL359837.1-201ENST00000381357 287 ntBASIC3.53□□□□□ -1.84
RPA3P35244 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
RPA3P35244 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.53□□□□□ -1.84
RPA3P35244 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.53□□□□□ -1.84
RPA3P35244 RANP4-201ENST00000413361 655 ntBASIC3.53□□□□□ -1.84
RPA3P35244 BTF3P9-201ENST00000418784 283 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AJ239321.1-201ENST00000424255 564 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AP000907.1-201ENST00000428428 510 ntBASIC3.53□□□□□ -1.84
RPA3P35244 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.53□□□□□ -1.84
RPA3P35244 AL645939.1-201ENST00000453429 797 ntBASIC3.53□□□□□ -1.84
RPA3P35244 RPL7P15-201ENST00000461190 712 ntBASIC3.53□□□□□ -1.84
RPA3P35244 HMGN1P8-201ENST00000463578 288 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AL672167.3-201ENST00000465951 960 ntBASIC3.53□□□□□ -1.84
RPA3P35244 RN7SL542P-201ENST00000467147 294 ntBASIC3.53□□□□□ -1.84
RPA3P35244 SETP14-201ENST00000497538 873 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AC023050.1-201ENST00000498198 304 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.53□□□□□ -1.84
RPA3P35244 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.53□□□□□ -1.84
RPA3P35244 AC007991.1-201ENST00000522680 631 ntBASIC3.53□□□□□ -1.84
RPA3P35244 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.53□□□□□ -1.84
RPA3P35244 AL161713.1-201ENST00000555538 145 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AC006130.2-201ENST00000586202 326 ntBASIC3.53□□□□□ -1.84
RPA3P35244 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.53□□□□□ -1.84
RPA3P35244 AC011492.1-201ENST00000600023 315 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AC055764.2-201ENST00000610089 670 ntBASIC3.53□□□□□ -1.84
RPA3P35244 AL121772.2-201ENST00000614331 297 ntBASIC3.53□□□□□ -1.84
RPA3P35244 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
RPA3P35244 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RPA3P35244 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
RPA3P35244 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPA3P35244 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RPA3P35244 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
RPA3P35244 AC022893.2-201ENST00000564832 3296 ntBASIC3.52□□□□□ -1.85
RPA3P35244 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RPA3P35244 MIR134-201ENST00000385258 73 ntBASIC3.52□□□□□ -1.85
RPA3P35244 RPL21P17-201ENST00000397467 475 ntBASIC3.52□□□□□ -1.85
RPA3P35244 GSTA12P-201ENST00000402398 508 ntBASIC3.52□□□□□ -1.85
RPA3P35244 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.52□□□□□ -1.85
RPA3P35244 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.52□□□□□ -1.85
RPA3P35244 AL121578.1-201ENST00000428051 892 ntBASIC3.52□□□□□ -1.85
RPA3P35244 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.52□□□□□ -1.85
RPA3P35244 AC122718.1-201ENST00000439448 744 ntBASIC3.52□□□□□ -1.85
RPA3P35244 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.52□□□□□ -1.85
RPA3P35244 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.52□□□□□ -1.85
RPA3P35244 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.52□□□□□ -1.85
RPA3P35244 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.52□□□□□ -1.85
RPA3P35244 FAM133DP-201ENST00000464802 691 ntBASIC3.52□□□□□ -1.85
RPA3P35244 RN7SL594P-201ENST00000470590 287 ntBASIC3.52□□□□□ -1.85
RPA3P35244 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.52□□□□□ -1.85
RPA3P35244 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.52□□□□□ -1.85
RPA3P35244 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.52□□□□□ -1.85
RPA3P35244 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.52□□□□□ -1.85
RPA3P35244 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
RPA3P35244 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.52□□□□□ -1.85
RPA3P35244 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.52□□□□□ -1.85
RPA3P35244 MED28P5-201ENST00000528254 438 ntBASIC3.52□□□□□ -1.85
RPA3P35244 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
RPA3P35244 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.52□□□□□ -1.85
RPA3P35244 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.52□□□□□ -1.85
RPA3P35244 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.52□□□□□ -1.85
RPA3P35244 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.52□□□□□ -1.85
RPA3P35244 AC004825.2-201ENST00000616634 455 ntBASIC3.52□□□□□ -1.85
RPA3P35244 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RPA3P35244 AC110801.1-201ENST00000623590 212 ntBASIC3.52□□□□□ -1.85
RPA3P35244 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RPA3P35244 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.52□□□□□ -1.85
RPA3P35244 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.52□□□□□ -1.85
RPA3P35244 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RPA3P35244 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.51□□□□□ -1.85
RPA3P35244 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 RNU6-670P-201ENST00000364312 104 ntBASIC3.51□□□□□ -1.85
RPA3P35244 SNORA62.3-201ENST00000365110 153 ntBASIC3.51□□□□□ -1.85
RPA3P35244 SKINT1L-201ENST00000401057 817 ntBASIC3.51□□□□□ -1.85
RPA3P35244 RNA5SP239-201ENST00000410218 129 ntBASIC3.51□□□□□ -1.85
RPA3P35244 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 RPL26P37-201ENST00000411983 438 ntBASIC3.51□□□□□ -1.85
RPA3P35244 AC017079.2-201ENST00000416102 485 ntBASIC3.51□□□□□ -1.85
RPA3P35244 FAR1P1-201ENST00000427163 934 ntBASIC3.51□□□□□ -1.85
RPA3P35244 AC018644.1-201ENST00000429934 551 ntBASIC3.51□□□□□ -1.85
RPA3P35244 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.51□□□□□ -1.85
RPA3P35244 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.51□□□□□ -1.85
RPA3P35244 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.51□□□□□ -1.85
RPA3P35244 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.51□□□□□ -1.85
RPA3P35244 CDC27P1-201ENST00000445384 715 ntBASIC3.51□□□□□ -1.85
RPA3P35244 OR7L1P-201ENST00000456181 380 ntBASIC3.51□□□□□ -1.85
RPA3P35244 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.51□□□□□ -1.85
RPA3P35244 FTH1P2-201ENST00000466086 412 ntBASIC3.51□□□□□ -1.85
RPA3P35244 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms