Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RCC2P2-201ENST00000422174 918 ntBASIC2.47□□□□□ -2.01
CKS2P33552 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CKS2P33552 AC244505.4-201ENST00000434905 287 ntBASIC2.47□□□□□ -2.01
CKS2P33552 CST9LP2-201ENST00000437612 320 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AC009969.1-201ENST00000438726 172 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.47□□□□□ -2.01
CKS2P33552 SSXP5-201ENST00000443473 287 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CKS2P33552 Z99127.3-201ENST00000448158 395 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AC115115.1-201ENST00000449927 248 ntBASIC2.47□□□□□ -2.01
CKS2P33552 PPIAP3-201ENST00000450588 505 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.47□□□□□ -2.01
CKS2P33552 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.47□□□□□ -2.01
CKS2P33552 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.47□□□□□ -2.01
CKS2P33552 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.47□□□□□ -2.01
CKS2P33552 AC146507.2-201ENST00000460608 476 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AC006463.2-201ENST00000473326 348 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.47□□□□□ -2.01
CKS2P33552 AC093278.1-201ENST00000494700 600 ntBASIC2.47□□□□□ -2.01
CKS2P33552 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.47□□□□□ -2.01
CKS2P33552 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.47□□□□□ -2.01
CKS2P33552 AC111000.5-201ENST00000506559 1178 ntBASIC2.47□□□□□ -2.01
CKS2P33552 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 RN7SKP82-201ENST00000516786 223 ntBASIC2.47□□□□□ -2.01
CKS2P33552 MRPL49P2-201ENST00000521066 465 ntBASIC2.47□□□□□ -2.01
CKS2P33552 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.47□□□□□ -2.01
CKS2P33552 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.47□□□□□ -2.01
CKS2P33552 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.47□□□□□ -2.01
CKS2P33552 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 MIR5187-201ENST00000583479 76 ntBASIC2.47□□□□□ -2.01
CKS2P33552 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 AC121761.2-201ENST00000617300 689 ntBASIC2.47□□□□□ -2.01
CKS2P33552 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 AC092184.1-201ENST00000625042 715 ntBASIC2.47□□□□□ -2.01
CKS2P33552 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.47□□□□□ -2.01
CKS2P33552 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 AC096656.1-201ENST00000623826 1364 ntBASIC2.47□□□□□ -2.01
CKS2P33552 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.47□□□□□ -2.01
CKS2P33552 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
CKS2P33552 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CKS2P33552 AC093010.3-201ENST00000570269 15214 ntBASIC2.46□□□□□ -2.02
CKS2P33552 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CKS2P33552 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CKS2P33552 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CKS2P33552 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CKS2P33552 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CKS2P33552 RNA5SP189-201ENST00000364920 115 ntBASIC2.46□□□□□ -2.02
CKS2P33552 SNORA51.4-201ENST00000364993 124 ntBASIC2.46□□□□□ -2.02
CKS2P33552 RSL24D1P1-201ENST00000404972 493 ntBASIC2.46□□□□□ -2.02
CKS2P33552 RPS4XP9-201ENST00000405151 780 ntBASIC2.46□□□□□ -2.02
CKS2P33552 SNORA11.5-201ENST00000408163 128 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.46□□□□□ -2.02
CKS2P33552 AL592293.2-201ENST00000422292 996 ntBASIC2.46□□□□□ -2.02
CKS2P33552 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CKS2P33552 AC068287.1-201ENST00000430283 295 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AL590103.1-201ENST00000434488 307 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AL662791.1-201ENST00000441992 928 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.46□□□□□ -2.02
CKS2P33552 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.46□□□□□ -2.02
CKS2P33552 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.46□□□□□ -2.02
CKS2P33552 SLC31A1P1-201ENST00000451221 567 ntBASIC2.46□□□□□ -2.02
CKS2P33552 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.46□□□□□ -2.02
CKS2P33552 AC016724.1-201ENST00000453215 421 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AC104308.1-201ENST00000454621 333 ntBASIC2.46□□□□□ -2.02
CKS2P33552 PTGES3P5-201ENST00000455109 434 ntBASIC2.46□□□□□ -2.02
CKS2P33552 RPL23AP12-201ENST00000467573 473 ntBASIC2.46□□□□□ -2.02
CKS2P33552 ST13P14-201ENST00000474095 734 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AC022336.1-201ENST00000475510 337 ntBASIC2.46□□□□□ -2.02
CKS2P33552 RPL30P11-201ENST00000495304 339 ntBASIC2.46□□□□□ -2.02
CKS2P33552 RNU6-352P-201ENST00000516908 107 ntBASIC2.46□□□□□ -2.02
CKS2P33552 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.46□□□□□ -2.02
CKS2P33552 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.46□□□□□ -2.02
CKS2P33552 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.46□□□□□ -2.02
CKS2P33552 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.46□□□□□ -2.02
CKS2P33552 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.46□□□□□ -2.02
CKS2P33552 PTP4A1P6-201ENST00000531034 478 ntBASIC2.46□□□□□ -2.02
CKS2P33552 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.46□□□□□ -2.02
CKS2P33552 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.46□□□□□ -2.02
CKS2P33552 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.46□□□□□ -2.02
CKS2P33552 AC022884.3-201ENST00000579571 248 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AC010928.3-201ENST00000587712 541 ntBASIC2.46□□□□□ -2.02
CKS2P33552 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.46□□□□□ -2.02
CKS2P33552 AC006557.5-201ENST00000603126 811 ntBASIC2.46□□□□□ -2.02
CKS2P33552 MIR6867-201ENST00000610636 67 ntBASIC2.46□□□□□ -2.02
CKS2P33552 U4.6-201ENST00000621618 127 ntBASIC2.46□□□□□ -2.02
CKS2P33552 FP236240.3-201ENST00000623061 327 ntBASIC2.46□□□□□ -2.02
CKS2P33552 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.46□□□□□ -2.02
CKS2P33552 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.46□□□□□ -2.02
CKS2P33552 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CKS2P33552 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CKS2P33552 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CKS2P33552 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.45□□□□□ -2.02
CKS2P33552 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.45□□□□□ -2.02
CKS2P33552 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.45□□□□□ -2.02
CKS2P33552 AL157700.1-201ENST00000561973 1432 ntBASIC2.45□□□□□ -2.02
CKS2P33552 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms