Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 OTUD4P1-201ENST00000237841 3067 ntBASIC4.72□□□□□ -1.65
CPS1P31327 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CPS1P31327 LINC02471-203ENST00000641941 4752 ntBASIC4.72□□□□□ -1.65
CPS1P31327 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CPS1P31327 RNU6-283P-201ENST00000364788 107 ntBASIC4.72□□□□□ -1.65
CPS1P31327 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CPS1P31327 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.72□□□□□ -1.65
CPS1P31327 NUP35P1-201ENST00000422734 947 ntBASIC4.72□□□□□ -1.65
CPS1P31327 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.72□□□□□ -1.65
CPS1P31327 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CPS1P31327 AL513124.1-201ENST00000450410 614 ntBASIC4.72□□□□□ -1.65
CPS1P31327 AC103968.1-201ENST00000557841 573 ntBASIC4.72□□□□□ -1.65
CPS1P31327 NRBF2P5-201ENST00000603087 788 ntBASIC4.72□□□□□ -1.65
CPS1P31327 BRDTP1-201ENST00000605735 677 ntBASIC4.72□□□□□ -1.65
CPS1P31327 AC015813.4-201ENST00000610469 179 ntBASIC4.72□□□□□ -1.65
CPS1P31327 AC233309.1-201ENST00000619522 751 ntBASIC4.72□□□□□ -1.65
CPS1P31327 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CPS1P31327 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CPS1P31327 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.71□□□□□ -1.65
CPS1P31327 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.71□□□□□ -1.65
CPS1P31327 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.71□□□□□ -1.65
CPS1P31327 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.71□□□□□ -1.66
CPS1P31327 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CPS1P31327 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CPS1P31327 Z99755.1-201ENST00000414048 380 ntBASIC4.71□□□□□ -1.66
CPS1P31327 IFNNP1-201ENST00000429219 553 ntBASIC4.71□□□□□ -1.66
CPS1P31327 MRPS18BP2-201ENST00000434310 759 ntBASIC4.71□□□□□ -1.66
CPS1P31327 AC017037.2-201ENST00000513850 890 ntBASIC4.71□□□□□ -1.66
CPS1P31327 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.71□□□□□ -1.66
CPS1P31327 HIGD1AP1-201ENST00000550979 275 ntBASIC4.71□□□□□ -1.66
CPS1P31327 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.71□□□□□ -1.66
CPS1P31327 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CPS1P31327 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CPS1P31327 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CPS1P31327 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CPS1P31327 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.7□□□□□ -1.66
CPS1P31327 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
CPS1P31327 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.7□□□□□ -1.66
CPS1P31327 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CPS1P31327 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.7□□□□□ -1.66
CPS1P31327 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.7□□□□□ -1.66
CPS1P31327 TXNP1-201ENST00000441872 371 ntBASIC4.7□□□□□ -1.66
CPS1P31327 RPL7P36-201ENST00000444633 681 ntBASIC4.7□□□□□ -1.66
CPS1P31327 AC069499.1-201ENST00000489433 509 ntBASIC4.7□□□□□ -1.66
CPS1P31327 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.7□□□□□ -1.66
CPS1P31327 RNU1-41P-201ENST00000516161 162 ntBASIC4.7□□□□□ -1.66
CPS1P31327 RNU1-48P-201ENST00000516400 162 ntBASIC4.7□□□□□ -1.66
CPS1P31327 DUXAP6-201ENST00000553858 601 ntBASIC4.7□□□□□ -1.66
CPS1P31327 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CPS1P31327 MIR4319-201ENST00000577285 85 ntBASIC4.7□□□□□ -1.66
CPS1P31327 AC233280.2-201ENST00000603917 1070 ntBASIC4.7□□□□□ -1.66
CPS1P31327 MIR486-1-201ENST00000612171 68 ntBASIC4.7□□□□□ -1.66
CPS1P31327 AC074276.2-201ENST00000619891 348 ntBASIC4.7□□□□□ -1.66
CPS1P31327 SNORD39.4-201ENST00000620099 78 ntBASIC4.7□□□□□ -1.66
CPS1P31327 KPNA2P2-201ENST00000419546 1489 ntBASIC4.7□□□□□ -1.66
CPS1P31327 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.7□□□□□ -1.66
CPS1P31327 AC138393.1-206ENST00000540997 1886 ntBASIC4.7□□□□□ -1.66
CPS1P31327 AL365361.1-201ENST00000566942 3481 ntBASIC4.69□□□□□ -1.66
CPS1P31327 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CPS1P31327 RNA5SP39-201ENST00000411245 120 ntBASIC4.69□□□□□ -1.66
CPS1P31327 MTND4P22-201ENST00000413116 1169 ntBASIC4.69□□□□□ -1.66
CPS1P31327 AC074367.1-201ENST00000438685 1125 ntBASIC4.69□□□□□ -1.66
CPS1P31327 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.69□□□□□ -1.66
CPS1P31327 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.69□□□□□ -1.66
CPS1P31327 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.69□□□□□ -1.66
CPS1P31327 Y_RNA.673-201ENST00000516306 88 ntBASIC4.69□□□□□ -1.66
CPS1P31327 OR4R3P-201ENST00000525084 838 ntBASIC4.69□□□□□ -1.66
CPS1P31327 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.69□□□□□ -1.66
CPS1P31327 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CPS1P31327 AC073073.2-201ENST00000609827 2578 ntBASIC4.69□□□□□ -1.66
CPS1P31327 AC105227.2-201ENST00000615075 605 ntBASIC4.69□□□□□ -1.66
CPS1P31327 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CPS1P31327 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.69□□□□□ -1.66
CPS1P31327 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CPS1P31327 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.68□□□□□ -1.66
CPS1P31327 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPS1P31327 RNU6-316P-201ENST00000391027 107 ntBASIC4.68□□□□□ -1.66
CPS1P31327 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPS1P31327 RNA5SP184-201ENST00000411071 108 ntBASIC4.68□□□□□ -1.66
CPS1P31327 AC105272.1-201ENST00000438604 198 ntBASIC4.68□□□□□ -1.66
CPS1P31327 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.68□□□□□ -1.66
CPS1P31327 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.68□□□□□ -1.66
CPS1P31327 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.68□□□□□ -1.66
CPS1P31327 OR5AP1P-201ENST00000529730 940 ntBASIC4.68□□□□□ -1.66
CPS1P31327 H3F3AP1-201ENST00000559984 334 ntBASIC4.68□□□□□ -1.66
CPS1P31327 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.68□□□□□ -1.66
CPS1P31327 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.68□□□□□ -1.66
CPS1P31327 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.68□□□□□ -1.66
CPS1P31327 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CPS1P31327 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.68□□□□□ -1.66
CPS1P31327 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.68□□□□□ -1.66
CPS1P31327 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPS1P31327 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CPS1P31327 AC093849.1-201ENST00000563631 2209 ntBASIC4.68□□□□□ -1.66
CPS1P31327 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CPS1P31327 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CPS1P31327 OR5BR1P-201ENST00000524992 1330 ntBASIC4.67□□□□□ -1.66
CPS1P31327 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.67□□□□□ -1.66
CPS1P31327 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.67□□□□□ -1.66
CPS1P31327 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms