Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-354P-201ENST00000383862 107 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 RNU6-610P-201ENST00000384264 107 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AL078595.1-201ENST00000404458 226 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 RN7SKP202-201ENST00000410439 330 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 AC004865.1-201ENST00000442276 1003 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 AL358232.1-201ENST00000448030 501 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 RPL35AP15-201ENST00000468042 339 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 AP001086.1-201ENST00000494882 321 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC010460.2-201ENST00000509054 677 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AC008958.1-201ENST00000511047 682 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 RNA5SP49-201ENST00000516450 115 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXC13P31276 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXC13P31276 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 AC010928.3-201ENST00000587712 541 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC025165.5-201ENST00000602802 578 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AC112230.1-201ENST00000604342 547 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AL009028.1-201ENST00000604895 802 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC13P31276 AC012531.5-201ENST00000611375 151 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AL138721.1-201ENST00000616756 179 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 RMST_9.1-201ENST00000619945 193 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AL445363.3-201ENST00000623080 671 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 AC019278.1-201ENST00000623516 479 ntBASIC4.46□□□□□ -1.7
HOXC13P31276 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC13P31276 AC068254.2-201ENST00000623938 3577 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 EXOC5P1-201ENST00000510543 1969 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXC13P31276 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXC13P31276 SNORA72.3-201ENST00000365074 132 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 SNORD6-201ENST00000365444 73 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 ENSAP1-201ENST00000392855 326 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 MIR1183-201ENST00000408856 89 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC13P31276 MTCYBP24-201ENST00000420387 1106 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 AL157831.1-201ENST00000426134 473 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 COX6CP15-201ENST00000426313 211 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC13P31276 AL513175.1-201ENST00000431492 780 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 GOT2P5-201ENST00000433995 546 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 RPL21P112-201ENST00000434403 463 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC13P31276 AC002542.1-201ENST00000440683 193 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 AL096829.2-201ENST00000446582 742 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 RPL23AP15-201ENST00000450202 459 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 BX248409.1-201ENST00000455497 255 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXC13P31276 AL592156.1-201ENST00000508758 304 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC13P31276 RNU5A-7P-201ENST00000515979 116 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC13P31276 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC13P31276 TVP23BP1-201ENST00000557500 617 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC13P31276 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC13P31276 VN1R88P-201ENST00000596787 292 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 AC025946.2-201ENST00000603398 234 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 BNIP3P4-201ENST00000604946 565 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms