Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6-146P-201ENST00000384602 108 ntBASIC3.75□□□□□ -1.81
SHC1P29353 SNORD116-6-201ENST00000384711 96 ntBASIC3.75□□□□□ -1.81
SHC1P29353 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 RN7SKP33-201ENST00000410942 340 ntBASIC3.75□□□□□ -1.81
SHC1P29353 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 AL365338.1-201ENST00000422282 858 ntBASIC3.75□□□□□ -1.81
SHC1P29353 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.75□□□□□ -1.81
SHC1P29353 COX6CP15-201ENST00000426313 211 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.75□□□□□ -1.81
SHC1P29353 AC091390.1-201ENST00000433904 331 ntBASIC3.75□□□□□ -1.81
SHC1P29353 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.75□□□□□ -1.81
SHC1P29353 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.75□□□□□ -1.81
SHC1P29353 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.75□□□□□ -1.81
SHC1P29353 AC005229.2-201ENST00000456995 399 ntBASIC3.75□□□□□ -1.81
SHC1P29353 PPIAP21-201ENST00000464473 501 ntBASIC3.75□□□□□ -1.81
SHC1P29353 RN7SL385P-201ENST00000468873 276 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.75□□□□□ -1.81
SHC1P29353 RPL23AP71-201ENST00000470966 469 ntBASIC3.75□□□□□ -1.81
SHC1P29353 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
SHC1P29353 AC082651.2-201ENST00000496833 166 ntBASIC3.75□□□□□ -1.81
SHC1P29353 RPL21P131-201ENST00000497298 483 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 KRT19P6-201ENST00000510983 209 ntBASIC3.75□□□□□ -1.81
SHC1P29353 RN7SKP141-201ENST00000516167 338 ntBASIC3.75□□□□□ -1.81
SHC1P29353 RNU6-1308P-201ENST00000516817 103 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.75□□□□□ -1.81
SHC1P29353 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.75□□□□□ -1.81
SHC1P29353 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.75□□□□□ -1.81
SHC1P29353 AC068446.3-201ENST00000555285 382 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.75□□□□□ -1.81
SHC1P29353 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 AC022884.3-201ENST00000579571 248 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC090312.1-201ENST00000580637 348 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC008088.1-201ENST00000580993 280 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 SS18L2P2-201ENST00000583960 235 ntBASIC3.75□□□□□ -1.81
SHC1P29353 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 AC025588.2-201ENST00000604851 466 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC092106.3-201ENST00000611308 722 ntBASIC3.75□□□□□ -1.81
SHC1P29353 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHC1P29353 AL359715.5-201ENST00000623431 443 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC026422.1-201ENST00000623961 452 ntBASIC3.75□□□□□ -1.81
SHC1P29353 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.75□□□□□ -1.81
SHC1P29353 BMS1P21-201ENST00000634565 365 ntBASIC3.75□□□□□ -1.81
SHC1P29353 AC139713.2-210ENST00000641741 992 ntBASIC3.75□□□□□ -1.81
SHC1P29353 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHC1P29353 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHC1P29353 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHC1P29353 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.75□□□□□ -1.81
SHC1P29353 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHC1P29353 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHC1P29353 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SHC1P29353 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SHC1P29353 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHC1P29353 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHC1P29353 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 MIR92A2-201ENST00000385299 75 ntBASIC3.74□□□□□ -1.81
SHC1P29353 RNU6-932P-201ENST00000391108 106 ntBASIC3.74□□□□□ -1.81
SHC1P29353 RNU11-4P-201ENST00000391149 133 ntBASIC3.74□□□□□ -1.81
SHC1P29353 ZNF603P-201ENST00000405613 487 ntBASIC3.74□□□□□ -1.81
SHC1P29353 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHC1P29353 RNA5SP498-201ENST00000411342 120 ntBASIC3.74□□□□□ -1.81
SHC1P29353 CYP1D1P-201ENST00000416662 1433 ntBASIC3.74□□□□□ -1.81
SHC1P29353 MTCO3P4-201ENST00000419236 787 ntBASIC3.74□□□□□ -1.81
SHC1P29353 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.74□□□□□ -1.81
SHC1P29353 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.74□□□□□ -1.81
SHC1P29353 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.74□□□□□ -1.81
SHC1P29353 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.74□□□□□ -1.81
SHC1P29353 AL356276.2-201ENST00000435919 558 ntBASIC3.74□□□□□ -1.81
SHC1P29353 AL357520.1-201ENST00000441557 453 ntBASIC3.74□□□□□ -1.81
SHC1P29353 AC023512.1-201ENST00000444513 499 ntBASIC3.74□□□□□ -1.81
SHC1P29353 Z99714.1-201ENST00000450463 807 ntBASIC3.74□□□□□ -1.81
SHC1P29353 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.74□□□□□ -1.81
SHC1P29353 GTF2IP12-201ENST00000456547 356 ntBASIC3.74□□□□□ -1.81
SHC1P29353 RNA5SP246-201ENST00000458909 119 ntBASIC3.74□□□□□ -1.81
SHC1P29353 RNU7-27P-201ENST00000459281 62 ntBASIC3.74□□□□□ -1.81
SHC1P29353 RPL7P19-201ENST00000469948 618 ntBASIC3.74□□□□□ -1.81
SHC1P29353 AC004263.1-201ENST00000479327 332 ntBASIC3.74□□□□□ -1.81
SHC1P29353 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.74□□□□□ -1.81
SHC1P29353 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.74□□□□□ -1.81
SHC1P29353 AC117522.2-201ENST00000510049 657 ntBASIC3.74□□□□□ -1.81
SHC1P29353 AC108120.2-201ENST00000512973 294 ntBASIC3.74□□□□□ -1.81
SHC1P29353 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.74□□□□□ -1.81
SHC1P29353 HIGD1AP18-201ENST00000520730 278 ntBASIC3.74□□□□□ -1.81
SHC1P29353 OR4A2P-201ENST00000527276 913 ntBASIC3.74□□□□□ -1.81
SHC1P29353 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.74□□□□□ -1.81
SHC1P29353 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.74□□□□□ -1.81
SHC1P29353 AC063950.1-201ENST00000552036 308 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms