Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.36□□□□□ -1.71
ABCD3P28288 AC245297.2-201ENST00000610119 565 ntBASIC4.36□□□□□ -1.71
ABCD3P28288 AC243773.3-201ENST00000613270 256 ntBASIC4.36□□□□□ -1.71
ABCD3P28288 AC090116.1-201ENST00000615679 446 ntBASIC4.36□□□□□ -1.71
ABCD3P28288 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.36□□□□□ -1.71
ABCD3P28288 CYP3A51P-201ENST00000633513 256 ntBASIC4.36□□□□□ -1.71
ABCD3P28288 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ABCD3P28288 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ABCD3P28288 ZFRP1-201ENST00000457579 2970 ntBASIC4.36□□□□□ -1.71
ABCD3P28288 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
ABCD3P28288 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ABCD3P28288 AC073429.2-201ENST00000569694 1444 ntBASIC4.36□□□□□ -1.71
ABCD3P28288 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ABCD3P28288 AL445487.1-201ENST00000415694 1580 ntBASIC4.36□□□□□ -1.71
ABCD3P28288 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
ABCD3P28288 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 SCN1A-220ENST00000641603 12506 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AL136164.3-201ENST00000624429 3978 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 AL590240.1-201ENST00000334118 313 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 RNU6-374P-201ENST00000364146 108 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCD3P28288 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 RNU6-730P-201ENST00000383954 104 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 MT-TC-201ENST00000387405 66 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 EIF5P1-201ENST00000400019 1231 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.35□□□□□ -1.71
ABCD3P28288 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 AL035410.1-201ENST00000427409 427 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.35□□□□□ -1.71
ABCD3P28288 RPL23AP74-201ENST00000437246 471 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ABCD3P28288 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCD3P28288 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCD3P28288 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 AL139824.2-201ENST00000458731 1095 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCD3P28288 RPS15AP17-201ENST00000470598 390 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AC020890.1-201ENST00000491837 504 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 AC026407.1-201ENST00000518369 204 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AC134698.5-201ENST00000519444 336 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
ABCD3P28288 OR5AK1P-201ENST00000524837 922 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.35□□□□□ -1.71
ABCD3P28288 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ABCD3P28288 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.35□□□□□ -1.71
ABCD3P28288 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCD3P28288 RN7SL652P-201ENST00000577769 300 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.35□□□□□ -1.71
ABCD3P28288 RPL23AP92-201ENST00000603609 255 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AC067852.7-201ENST00000623270 535 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCD3P28288 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCD3P28288 AC010928.1-201ENST00000592477 1447 ntBASIC4.35□□□□□ -1.71
ABCD3P28288 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCD3P28288 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.34□□□□□ -1.71
ABCD3P28288 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.34□□□□□ -1.71
ABCD3P28288 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.34□□□□□ -1.71
ABCD3P28288 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 OR52B1P-201ENST00000316506 909 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ABCD3P28288 RNU6-1214P-201ENST00000363650 109 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ABCD3P28288 AC016769.3-201ENST00000396562 315 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 MIR298-201ENST00000401212 88 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 RPS24P12-201ENST00000402084 394 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AP000580.1-201ENST00000404439 358 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 MIR1284-201ENST00000408337 120 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 RN7SKP267-201ENST00000410381 285 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.34□□□□□ -1.71
ABCD3P28288 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCD3P28288 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCD3P28288 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC004690.1-201ENST00000418216 328 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 RPL7P57-201ENST00000423238 740 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCD3P28288 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCD3P28288 RPL36AP15-201ENST00000444514 266 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms