Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 AC005332.5-201ENST00000591222 2919 ntBASIC4.86□□□□□ -1.63
CD40P25942 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.86□□□□□ -1.63
CD40P25942 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 OR5J1P-201ENST00000313544 939 ntBASIC4.86□□□□□ -1.63
CD40P25942 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 RNU5E-1-201ENST00000362477 120 ntBASIC4.86□□□□□ -1.63
CD40P25942 RNY4P14-201ENST00000363656 96 ntBASIC4.86□□□□□ -1.63
CD40P25942 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD40P25942 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 GNG5P2-201ENST00000372054 207 ntBASIC4.86□□□□□ -1.63
CD40P25942 RN7SKP235-201ENST00000410662 305 ntBASIC4.86□□□□□ -1.63
CD40P25942 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.86□□□□□ -1.63
CD40P25942 NPM1P4-201ENST00000414095 812 ntBASIC4.86□□□□□ -1.63
CD40P25942 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.86□□□□□ -1.63
CD40P25942 CNOT7P2-201ENST00000441051 832 ntBASIC4.86□□□□□ -1.63
CD40P25942 AL049734.2-201ENST00000441066 616 ntBASIC4.86□□□□□ -1.63
CD40P25942 USP9YP15-201ENST00000442391 422 ntBASIC4.86□□□□□ -1.63
CD40P25942 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 MTND1P12-201ENST00000455231 147 ntBASIC4.86□□□□□ -1.63
CD40P25942 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 RN7SL51P-201ENST00000468230 285 ntBASIC4.86□□□□□ -1.63
CD40P25942 AC100832.1-201ENST00000471945 383 ntBASIC4.86□□□□□ -1.63
CD40P25942 RN7SL177P-201ENST00000476596 299 ntBASIC4.86□□□□□ -1.63
CD40P25942 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.86□□□□□ -1.63
CD40P25942 MTCO3P44-201ENST00000510977 541 ntBASIC4.86□□□□□ -1.63
CD40P25942 AC005798.1-201ENST00000513715 387 ntBASIC4.86□□□□□ -1.63
CD40P25942 Y_RNA.704-201ENST00000516851 102 ntBASIC4.86□□□□□ -1.63
CD40P25942 IGLV3-24-201ENST00000517477 197 ntBASIC4.86□□□□□ -1.63
CD40P25942 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 AC022790.1-201ENST00000522872 204 ntBASIC4.86□□□□□ -1.63
CD40P25942 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.86□□□□□ -1.63
CD40P25942 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.86□□□□□ -1.63
CD40P25942 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.86□□□□□ -1.63
CD40P25942 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.86□□□□□ -1.63
CD40P25942 UBE2L4-201ENST00000587688 464 ntBASIC4.86□□□□□ -1.63
CD40P25942 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.86□□□□□ -1.63
CD40P25942 AL009028.1-201ENST00000604895 802 ntBASIC4.86□□□□□ -1.63
CD40P25942 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.86□□□□□ -1.63
CD40P25942 AC004067.1-201ENST00000608733 700 ntBASIC4.86□□□□□ -1.63
CD40P25942 AL138960.1-201ENST00000613838 513 ntBASIC4.86□□□□□ -1.63
CD40P25942 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.86□□□□□ -1.63
CD40P25942 MIR8080-201ENST00000622224 89 ntBASIC4.86□□□□□ -1.63
CD40P25942 AL158801.5-201ENST00000623123 465 ntBASIC4.86□□□□□ -1.63
CD40P25942 AC132068.1-201ENST00000623805 459 ntBASIC4.86□□□□□ -1.63
CD40P25942 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 AC099654.14-201ENST00000638599 341 ntBASIC4.86□□□□□ -1.63
CD40P25942 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.86□□□□□ -1.63
CD40P25942 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CD40P25942 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CD40P25942 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 SAMMSON-213ENST00000641336 1521 ntBASIC4.86□□□□□ -1.63
CD40P25942 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 AC091046.3-201ENST00000631455 1574 ntBASIC4.86□□□□□ -1.63
CD40P25942 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.86□□□□□ -1.63
CD40P25942 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CD40P25942 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD40P25942 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 SAGE4P-201ENST00000442271 3381 ntBASIC4.85□□□□□ -1.63
CD40P25942 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.85□□□□□ -1.63
CD40P25942 RNU6-181P-201ENST00000363225 107 ntBASIC4.85□□□□□ -1.63
CD40P25942 RN7SKP162-201ENST00000363605 345 ntBASIC4.85□□□□□ -1.63
CD40P25942 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 MIR551A-201ENST00000385042 96 ntBASIC4.85□□□□□ -1.63
CD40P25942 MTND4LP20-201ENST00000402379 270 ntBASIC4.85□□□□□ -1.63
CD40P25942 CCDC58P2-201ENST00000417131 366 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms