Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 AC135352.1-201ENST00000506173 1418 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TNFSF4P23510 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 Z98755.1-201ENST00000407015 1384 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC092376.2-201ENST00000622621 4116 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 SNORA16A-201ENST00000384342 137 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 MIR223-201ENST00000385204 110 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 RPS3AP26-201ENST00000398259 784 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC025750.1-201ENST00000399891 379 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 MTCO1P17-201ENST00000411522 491 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AL389915.1-201ENST00000422463 466 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 AL365184.2-201ENST00000431139 435 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF4P23510 RPS3AP54-201ENST00000435535 734 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AP000942.1-201ENST00000463969 747 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 RPS4XP10-201ENST00000465034 731 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 RPL5P30-201ENST00000465511 891 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 UBTFL6-201ENST00000477929 1024 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AP001025.2-201ENST00000490908 477 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC006390.1-201ENST00000508068 283 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC117532.1-201ENST00000514638 323 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 HMGN1P9-201ENST00000515212 298 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 SCARNA20.4-201ENST00000516969 131 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 HIGD1AP10-201ENST00000527837 282 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 OR4P1P-201ENST00000530808 1136 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC013828.2-201ENST00000532487 235 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC126177.5-201ENST00000549599 178 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC090616.5-202ENST00000582111 297 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AP000769.2-201ENST00000602344 396 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC015726.1-201ENST00000602353 681 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AL451044.1-201ENST00000604867 238 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AP001784.1-201ENST00000624107 428 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 CRYM-AS1-204ENST00000637983 556 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF4P23510 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
TNFSF4P23510 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 AC092447.10-201ENST00000620607 1652 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 AC021755.1-201ENST00000559747 1447 ntBASIC4.54□□□□□ -1.68
TNFSF4P23510 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF4P23510 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF4P23510 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF4P23510 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TNFSF4P23510 RNU6-744P-201ENST00000365557 107 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TNFSF4P23510 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TNFSF4P23510 RNU6-1316P-201ENST00000384242 108 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 OR8V1P-201ENST00000395193 873 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 RNU4-78P-201ENST00000410940 126 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF4P23510 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF4P23510 RAD23BP1-201ENST00000421404 1227 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AL355433.1-201ENST00000422804 300 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFSF4P23510 LARP1BP3-201ENST00000437229 869 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF4P23510 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFSF4P23510 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 BMI1P1-201ENST00000445879 941 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 AC116337.2-201ENST00000477662 156 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AL024509.2-201ENST00000493462 493 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC034222.1-201ENST00000494052 532 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms