Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 IGKV7-3-201ENST00000357453 298 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RNU6-582P-201ENST00000362989 107 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RNU6-216P-201ENST00000363282 104 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 Y_RNA.296-201ENST00000364930 108 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 Y_RNA.402-201ENST00000383972 102 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 SNORA51.12-201ENST00000384448 134 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RNU6-1122P-201ENST00000384449 107 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NR4A1P22736 U3.25-201ENST00000391209 220 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC013442.1-201ENST00000397347 228 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RPS24P12-201ENST00000402084 394 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 OR3A2-201ENST00000408891 1076 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.81□□□□□ -1.64
NR4A1P22736 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.81□□□□□ -1.64
NR4A1P22736 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.81□□□□□ -1.64
NR4A1P22736 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.81□□□□□ -1.64
NR4A1P22736 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
NR4A1P22736 BTF3P10-201ENST00000433415 495 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 BMS1P19-201ENST00000433925 393 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 HMGB3P10-201ENST00000434734 572 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 CLUHP1-201ENST00000435012 1190 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RPL37P21-201ENST00000435890 276 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 CACYBPP1-201ENST00000438592 684 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.81□□□□□ -1.64
NR4A1P22736 AL390119.1-201ENST00000440329 312 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC092809.1-201ENST00000441469 474 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 USP9YP8-201ENST00000441913 500 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 OR7E125P-201ENST00000443450 846 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.81□□□□□ -1.64
NR4A1P22736 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 AC108161.1-201ENST00000461060 402 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
NR4A1P22736 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 AC108078.1-201ENST00000508073 725 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AL671862.1-201ENST00000515851 349 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 HMGB1P19-201ENST00000517578 577 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.81□□□□□ -1.64
NR4A1P22736 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.81□□□□□ -1.64
NR4A1P22736 RAB11AP2-201ENST00000545905 639 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.81□□□□□ -1.64
NR4A1P22736 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.81□□□□□ -1.64
NR4A1P22736 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.81□□□□□ -1.64
NR4A1P22736 BNIP3P9-201ENST00000603714 553 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AL161729.4-201ENST00000604650 476 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.81□□□□□ -1.64
NR4A1P22736 AC007038.2-201ENST00000608095 740 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.81□□□□□ -1.64
NR4A1P22736 AL359535.1-201ENST00000612100 1087 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC018926.3-201ENST00000618841 406 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC136475.10-201ENST00000620253 385 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC145207.9-201ENST00000623802 325 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC132068.1-201ENST00000623805 459 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 AC120349.2-201ENST00000625002 298 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
NR4A1P22736 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 HSPA8P18-201ENST00000439846 1928 ntBASIC4.81□□□□□ -1.64
NR4A1P22736 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NR4A1P22736 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NR4A1P22736 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NR4A1P22736 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NR4A1P22736 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
NR4A1P22736 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A1P22736 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NR4A1P22736 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
NR4A1P22736 AP001273.1-201ENST00000624493 3152 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
NR4A1P22736 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.8□□□□□ -1.64
NR4A1P22736 Y_RNA.25-201ENST00000362528 102 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 RNA5SP319-201ENST00000362768 119 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 RNU4-44P-201ENST00000363050 141 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 RNA5SP132-201ENST00000364725 118 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.8□□□□□ -1.64
NR4A1P22736 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.8□□□□□ -1.64
NR4A1P22736 SNORD116-23-201ENST00000384645 92 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 MT-TL1-201ENST00000386347 75 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NR4A1P22736 RNU6-1009P-201ENST00000390996 107 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 RNU6-876P-201ENST00000391295 104 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 MTCO3P40-201ENST00000392516 676 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 Z93019.1-201ENST00000416450 973 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.8□□□□□ -1.64
NR4A1P22736 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.8□□□□□ -1.64
NR4A1P22736 AC083875.1-201ENST00000419509 405 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 AC079355.1-201ENST00000421770 223 ntBASIC4.8□□□□□ -1.64
NR4A1P22736 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.8□□□□□ -1.64
NR4A1P22736 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A1P22736 AL953862.1-201ENST00000423016 168 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms