Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
LIG1P18858 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 AC083843.2-201ENST00000568248 6253 ntBASIC6.25□□□□□ -1.41
LIG1P18858 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 RNA5SP46-201ENST00000362370 120 ntBASIC6.25□□□□□ -1.41
LIG1P18858 RN7SKP224-201ENST00000364140 325 ntBASIC6.25□□□□□ -1.41
LIG1P18858 MIR320B1-201ENST00000390209 79 ntBASIC6.25□□□□□ -1.41
LIG1P18858 U8.14-201ENST00000390843 143 ntBASIC6.25□□□□□ -1.41
LIG1P18858 SDHDP6-201ENST00000414693 480 ntBASIC6.25□□□□□ -1.41
LIG1P18858 SDCBPP3-201ENST00000419629 891 ntBASIC6.25□□□□□ -1.41
LIG1P18858 CHEK2P5-201ENST00000423877 246 ntBASIC6.25□□□□□ -1.41
LIG1P18858 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.25□□□□□ -1.41
LIG1P18858 AC009961.2-201ENST00000435771 251 ntBASIC6.25□□□□□ -1.41
LIG1P18858 MTND6P13-201ENST00000443510 523 ntBASIC6.25□□□□□ -1.41
LIG1P18858 PTMAP3-201ENST00000447474 330 ntBASIC6.25□□□□□ -1.41
LIG1P18858 MTND1P18-201ENST00000448191 573 ntBASIC6.25□□□□□ -1.41
LIG1P18858 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
LIG1P18858 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.25□□□□□ -1.41
LIG1P18858 NF1P3-201ENST00000457709 450 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AC023141.9-201ENST00000458734 412 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AC012170.1-201ENST00000495139 359 ntBASIC6.25□□□□□ -1.41
LIG1P18858 RNU6-583P-201ENST00000516012 92 ntBASIC6.25□□□□□ -1.41
LIG1P18858 IGKV2D-10-201ENST00000520194 281 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AC027309.2-201ENST00000520566 192 ntBASIC6.25□□□□□ -1.41
LIG1P18858 ARL2BPP5-201ENST00000523141 481 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.25□□□□□ -1.41
LIG1P18858 AC068587.4-201ENST00000533893 186 ntBASIC6.25□□□□□ -1.41
LIG1P18858 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.25□□□□□ -1.41
LIG1P18858 CBX3P5-201ENST00000552017 521 ntBASIC6.25□□□□□ -1.41
LIG1P18858 IGBP1P1-201ENST00000554337 1009 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.25□□□□□ -1.41
LIG1P18858 AC025678.1-201ENST00000567861 338 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.25□□□□□ -1.41
LIG1P18858 FO393422.1-201ENST00000603908 708 ntBASIC6.25□□□□□ -1.41
LIG1P18858 RNA5SP440-201ENST00000612665 119 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AC145207.9-201ENST00000623802 325 ntBASIC6.25□□□□□ -1.41
LIG1P18858 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.25□□□□□ -1.41
LIG1P18858 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 CASC19-284ENST00000642142 1868 ntBASIC6.25□□□□□ -1.41
LIG1P18858 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
LIG1P18858 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIG1P18858 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.25□□□□□ -1.41
LIG1P18858 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.24□□□□□ -1.41
LIG1P18858 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LIG1P18858 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.24□□□□□ -1.41
LIG1P18858 MTCO1P14-201ENST00000441695 1559 ntBASIC6.24□□□□□ -1.41
LIG1P18858 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIG1P18858 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 OR52E6-202ENST00000379946 954 ntBASIC6.24□□□□□ -1.41
LIG1P18858 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.24□□□□□ -1.41
LIG1P18858 RN7SKP206-201ENST00000410823 293 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.24□□□□□ -1.41
LIG1P18858 NPM1P40-201ENST00000412758 733 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AL596448.1-201ENST00000415024 392 ntBASIC6.24□□□□□ -1.41
LIG1P18858 RPS3AP9-201ENST00000417027 792 ntBASIC6.24□□□□□ -1.41
LIG1P18858 ZNF90P2-204ENST00000419323 1075 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.24□□□□□ -1.41
LIG1P18858 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.24□□□□□ -1.41
LIG1P18858 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 RPL7AP49-201ENST00000429522 581 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC109583.1-201ENST00000432156 268 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AL591438.1-201ENST00000433508 581 ntBASIC6.24□□□□□ -1.41
LIG1P18858 TXNP5-201ENST00000441043 315 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.24□□□□□ -1.41
LIG1P18858 RPS27AP15-201ENST00000447672 466 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AL590365.1-201ENST00000450788 243 ntBASIC6.24□□□□□ -1.41
LIG1P18858 RAD23BP3-201ENST00000454157 1152 ntBASIC6.24□□□□□ -1.41
LIG1P18858 RPL38P1-201ENST00000460914 211 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 AC015724.1-201ENST00000478577 156 ntBASIC6.24□□□□□ -1.41
LIG1P18858 RPS27P23-201ENST00000487608 251 ntBASIC6.24□□□□□ -1.41
LIG1P18858 RNA5SP362-201ENST00000516048 118 ntBASIC6.24□□□□□ -1.41
LIG1P18858 Y_RNA.693-201ENST00000516641 110 ntBASIC6.24□□□□□ -1.41
LIG1P18858 OR8A2P-201ENST00000528631 952 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC027369.5-201ENST00000533838 755 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 AP005403.1-201ENST00000579720 229 ntBASIC6.24□□□□□ -1.41
LIG1P18858 H3F3BP2-201ENST00000583907 357 ntBASIC6.24□□□□□ -1.41
LIG1P18858 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.24□□□□□ -1.41
LIG1P18858 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.24□□□□□ -1.41
LIG1P18858 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.24□□□□□ -1.41
LIG1P18858 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.24□□□□□ -1.41
LIG1P18858 AC103710.4-201ENST00000609301 899 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC018926.3-201ENST00000618841 406 ntBASIC6.24□□□□□ -1.41
LIG1P18858 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.24□□□□□ -1.41
LIG1P18858 AC116563.2-201ENST00000624751 535 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC006065.6-201ENST00000625201 545 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AL049767.1-202ENST00000637826 242 ntBASIC6.24□□□□□ -1.41
LIG1P18858 AC112487.2-201ENST00000637950 304 ntBASIC6.24□□□□□ -1.41
LIG1P18858 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms