Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC119751.1-201ENST00000513357 765 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 RN7SKP21-201ENST00000516503 220 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC007599.1-201ENST00000568688 1174 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AC079171.1-201ENST00000568788 914 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 BPTFP1-201ENST00000579209 492 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AP001180.3-201ENST00000582221 145 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AC017100.2-201ENST00000584628 355 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFRAP16234 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC025946.2-201ENST00000603398 234 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AL451044.1-201ENST00000604867 238 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AC012603.1-201ENST00000606424 528 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AP004247.3-201ENST00000608682 624 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFRAP16234 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFRAP16234 BX649567.1-201ENST00000642071 1134 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PDGFRAP16234 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFRAP16234 ZNF962P-201ENST00000443465 3140 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PDGFRAP16234 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDGFRAP16234 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 SNORD35B-201ENST00000363660 87 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 RNU1-13P-201ENST00000384499 162 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 RNU11-4P-201ENST00000391149 133 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC092638.1-201ENST00000411966 1275 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC108032.1-201ENST00000416706 207 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 NUP35P2-201ENST00000416748 943 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 TAF13P2-201ENST00000416876 286 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 RPL7P53-201ENST00000421245 739 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC008065.1-201ENST00000428525 348 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AL513175.1-201ENST00000431492 780 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 ELOCP18-201ENST00000434209 337 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 OR4C10P-201ENST00000434991 931 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFRAP16234 RNU6-488P-201ENST00000515918 99 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 RNA5SP154-201ENST00000516193 111 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 IGKV2-38-201ENST00000517443 247 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 SOD1P3-201ENST00000518682 454 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 MTND1P6-201ENST00000523621 946 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFRAP16234 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 MIR5684-201ENST00000585074 65 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 VN1R87P-201ENST00000596706 487 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC011492.1-201ENST00000600023 315 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC067959.1-201ENST00000604334 379 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC104662.1-201ENST00000604448 511 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC114878.2-201ENST00000604863 1251 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC099785.1-201ENST00000605697 437 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 MIR7151-201ENST00000617477 60 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC010608.2-201ENST00000624830 470 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 AC126544.2-201ENST00000625174 749 ntBASIC4.28□□□□□ -1.72
PDGFRAP16234 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFRAP16234 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PDGFRAP16234 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDGFRAP16234 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 OR11H4-201ENST00000315409 1082 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 SNORA60-201ENST00000362396 134 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 RNA5SP130-201ENST00000364431 114 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFRAP16234 RNU6-1176P-201ENST00000390955 107 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms