Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RPL22P17-201ENST00000438729 315 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 USP9YP12-201ENST00000450481 570 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RPS29P22-201ENST00000472363 168 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC006463.2-201ENST00000473326 348 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 FAM172BP-201ENST00000487497 1089 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 SAP18P1-201ENST00000512058 390 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RNU6-150P-201ENST00000516237 95 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AP004607.2-201ENST00000533949 322 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AL163952.1-202ENST00000569625 600 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC034268.2-201ENST00000571784 482 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC116312.1-201ENST00000606841 314 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AL355816.1-201ENST00000607951 118 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC103710.4-201ENST00000609301 899 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC068880.5-201ENST00000624331 290 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 RNA5SP123-201ENST00000363244 119 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 RNU6-483P-201ENST00000384088 108 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 SNRPEP2-201ENST00000397592 279 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 RPS3AP36-201ENST00000398190 775 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 RNU4-55P-201ENST00000410731 137 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AL356583.2-201ENST00000426536 280 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 CEACAMP9-201ENST00000442990 513 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 HMGN3P1-201ENST00000453847 193 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 MEMO1P3-201ENST00000459811 302 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC022447.3-201ENST00000506865 495 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 RNU6-347P-201ENST00000516658 105 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 OR5AN2P-201ENST00000534535 896 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC005341.1-201ENST00000571086 708 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 MIR4301-201ENST00000577203 66 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AC087783.2-201ENST00000605070 562 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 MIR6810-201ENST00000622701 70 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AP003400.3-201ENST00000624904 346 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 OR2L1P-202ENST00000641567 1023 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 AL606537.1-201ENST00000607258 2011 ntBASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CSB-PGBD3P0DP91 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AL353796.1-201ENST00000561542 3241 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC022034.1-201ENST00000512867 2156 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 SNORD56.2-201ENST00000363242 71 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 CYB5AP4-201ENST00000396692 399 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AL390316.1-201ENST00000406279 553 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 VN1R8P-201ENST00000407739 893 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 GSTM3P2-201ENST00000412746 530 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 PRELID3BP11-201ENST00000414230 479 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC092017.2-201ENST00000427600 362 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AL360081.1-201ENST00000428299 555 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 RPL37P1-201ENST00000432310 284 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 RPL37P21-201ENST00000435890 276 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC009220.1-201ENST00000451614 275 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC026412.2-201ENST00000512270 1075 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AF131216.2-201ENST00000512316 564 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms