Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PTGES3P1-201ENST00000439531 483 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AL157827.1-201ENST00000447622 132 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AL591363.1-201ENST00000450091 483 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC6P09630 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC6P09630 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 GTF2IP12-201ENST00000456547 356 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 PSMC1P13-201ENST00000458195 985 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXC6P09630 AC008837.1-201ENST00000511513 412 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC6P09630 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC6P09630 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC6P09630 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC6P09630 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC6P09630 AP005136.1-201ENST00000579765 429 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC015688.2-201ENST00000584523 262 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 SLC25A36P1-201ENST00000590111 465 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC6P09630 AC068020.1-201ENST00000594215 661 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC096553.1-201ENST00000605169 829 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC069200.1-201ENST00000609511 323 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC090116.1-201ENST00000615679 446 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXC6P09630 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HOXC6P09630 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 AC017007.4-201ENST00000503353 1352 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 RNU6-1320P-201ENST00000390838 107 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 RNU6-1269P-201ENST00000391139 107 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 HNRNPDP2-201ENST00000406475 478 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC6P09630 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC6P09630 AL356320.2-201ENST00000417263 507 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 HMGB1P49-201ENST00000418882 569 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC090960.1-201ENST00000421072 306 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC069157.1-201ENST00000421749 137 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC246680.2-201ENST00000422106 389 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC6P09630 C1DP1-201ENST00000426049 402 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 YME1L1P1-201ENST00000429435 297 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 MTCO1P54-201ENST00000430139 712 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 MOB1AP1-201ENST00000430903 535 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC6P09630 EEF1A1P39-201ENST00000440791 250 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC6P09630 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC6P09630 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC6P09630 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXC6P09630 ABCF2P2-201ENST00000450549 296 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AL133217.1-201ENST00000450980 425 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 RPS6P2-201ENST00000454208 705 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC244505.3-201ENST00000454598 187 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC6P09630 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC6P09630 RNU6-599P-201ENST00000459383 107 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 RNU6-1193P-201ENST00000459461 107 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC6P09630 AC025459.1-201ENST00000504072 156 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 MTCYBP19-201ENST00000517463 1124 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 MTCO1P47-201ENST00000523889 1271 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC006518.2-201ENST00000542513 940 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC6P09630 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC6P09630 AC124856.1-201ENST00000600819 896 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AL133507.1-201ENST00000605269 557 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 AC009318.3-201ENST00000616916 503 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 RNU6-368P-201ENST00000620928 107 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 RNU6-538P-201ENST00000622329 107 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC6P09630 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC6P09630 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC6P09630 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
HOXC6P09630 AC093775.1-201ENST00000624154 1868 ntBASIC4.66□□□□□ -1.66
HOXC6P09630 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC6P09630 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC6P09630 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
HOXC6P09630 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXC6P09630 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC6P09630 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC6P09630 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXC6P09630 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC6P09630 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC6P09630 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.65□□□□□ -1.66
HOXC6P09630 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXC6P09630 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC6P09630 Y_RNA.333-201ENST00000365274 102 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms