Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL133370.2-201ENST00000619934 439 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 AC073476.4-201ENST00000628409 72 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC010733.2-201ENST00000589496 5702 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.68□□□□□ -1.98
CXCL1P09341 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL1P09341 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL1P09341 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL1P09341 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL1P09341 SNORA51.4-201ENST00000364993 124 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 SNORA62-201ENST00000365493 153 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 HMGB1P10-201ENST00000395823 563 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 SOD2P1-201ENST00000396543 562 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 SNORA3.3-201ENST00000408712 125 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 RN7SKP278-201ENST00000410504 342 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.67□□□□□ -1.98
CXCL1P09341 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.67□□□□□ -1.98
CXCL1P09341 MTND2P15-201ENST00000418575 892 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 COX6CP17-201ENST00000421389 185 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AC245028.1-201ENST00000423259 256 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL1P09341 UBE2V2P1-201ENST00000434717 398 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 RPS7P5-201ENST00000441482 581 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 CYCSP42-201ENST00000450823 238 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL1P09341 RN7SL594P-201ENST00000470590 287 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 RPS29P22-201ENST00000472363 168 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL1P09341 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL1P09341 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.67□□□□□ -1.98
CXCL1P09341 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL1P09341 AC022695.1-201ENST00000522089 237 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL1P09341 AC137768.1-201ENST00000549998 553 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL1P09341 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.67□□□□□ -1.98
CXCL1P09341 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.67□□□□□ -1.98
CXCL1P09341 SS18L2P2-201ENST00000583960 235 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL1P09341 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL1P09341 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AP000346.3-201ENST00000622821 210 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 AC048347.1-201ENST00000624621 427 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 MIR492-201ENST00000638676 116 ntBASIC2.67□□□□□ -1.98
CXCL1P09341 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.67□□□□□ -1.98
CXCL1P09341 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL1P09341 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL1P09341 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL1P09341 RNA5SP189-201ENST00000364920 115 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 MIR153-1-201ENST00000384914 90 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.66□□□□□ -1.98
CXCL1P09341 RN7SKP58-201ENST00000411010 305 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AL356095.1-201ENST00000417217 199 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.66□□□□□ -1.98
CXCL1P09341 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL1P09341 AL390023.1-201ENST00000428836 262 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL1P09341 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL1P09341 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.66□□□□□ -1.98
CXCL1P09341 RPL23AP67-201ENST00000465341 474 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AC117394.1-201ENST00000477323 567 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL1P09341 AC147055.1-201ENST00000509261 750 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL1P09341 RNA5SP217-201ENST00000515959 91 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 CYCSP30-201ENST00000546447 172 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AC008083.2-201ENST00000546707 476 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL1P09341 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.66□□□□□ -1.98
CXCL1P09341 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.66□□□□□ -1.98
CXCL1P09341 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.66□□□□□ -1.98
CXCL1P09341 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL1P09341 MIR4277-201ENST00000578298 84 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL1P09341 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.66□□□□□ -1.98
CXCL1P09341 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.66□□□□□ -1.98
CXCL1P09341 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL1P09341 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL1P09341 AC019176.2-201ENST00000611579 315 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AP003355.3-201ENST00000623465 114 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL1P09341 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.66□□□□□ -1.98
CXCL1P09341 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL1P09341 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CXCL1P09341 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CXCL1P09341 AL353743.4-201ENST00000422653 1547 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CXCL1P09341 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 RNA5SP344-201ENST00000411081 104 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL1P09341 BMS1P22-201ENST00000414726 313 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL1P09341 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL1P09341 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC068287.1-201ENST00000430283 295 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms