Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOC1P02654 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.16□□□□□ -1.9
APOC1P02654 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.16□□□□□ -1.9
APOC1P02654 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.16□□□□□ -1.9
APOC1P02654 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.16□□□□□ -1.9
APOC1P02654 MIR5685-201ENST00000579080 79 ntBASIC3.16□□□□□ -1.9
APOC1P02654 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.16□□□□□ -1.9
APOC1P02654 BNIP3P38-201ENST00000601117 544 ntBASIC3.16□□□□□ -1.9
APOC1P02654 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.16□□□□□ -1.9
APOC1P02654 AC110801.1-201ENST00000623590 212 ntBASIC3.16□□□□□ -1.9
APOC1P02654 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.16□□□□□ -1.9
APOC1P02654 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
APOC1P02654 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOC1P02654 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
APOC1P02654 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOC1P02654 AL118496.1-201ENST00000440201 1812 ntBASIC3.15□□□□□ -1.91
APOC1P02654 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOC1P02654 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.15□□□□□ -1.91
APOC1P02654 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOC1P02654 RN7SKP280-201ENST00000364196 304 ntBASIC3.15□□□□□ -1.91
APOC1P02654 RNA5SP42-201ENST00000364278 115 ntBASIC3.15□□□□□ -1.91
APOC1P02654 RNA5SP189-201ENST00000364920 115 ntBASIC3.15□□□□□ -1.91
APOC1P02654 RNU6-55P-201ENST00000411092 107 ntBASIC3.15□□□□□ -1.91
APOC1P02654 RNU6-954P-201ENST00000411355 107 ntBASIC3.15□□□□□ -1.91
APOC1P02654 MTND4LP21-201ENST00000415303 295 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AC245054.1-201ENST00000420944 258 ntBASIC3.15□□□□□ -1.91
APOC1P02654 ELOCP6-201ENST00000429066 328 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AL158071.1-201ENST00000430315 461 ntBASIC3.15□□□□□ -1.91
APOC1P02654 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.15□□□□□ -1.91
APOC1P02654 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.15□□□□□ -1.91
APOC1P02654 FTH1P1-201ENST00000437933 532 ntBASIC3.15□□□□□ -1.91
APOC1P02654 HSPE1P28-201ENST00000443139 211 ntBASIC3.15□□□□□ -1.91
APOC1P02654 UBDP1-202ENST00000457888 382 ntBASIC3.15□□□□□ -1.91
APOC1P02654 ELOCP12-201ENST00000458706 328 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.15□□□□□ -1.91
APOC1P02654 AC114967.1-201ENST00000504890 259 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AC110768.1-201ENST00000509222 400 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.15□□□□□ -1.91
APOC1P02654 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.15□□□□□ -1.91
APOC1P02654 OR5AP1P-201ENST00000529730 940 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AP000619.3-201ENST00000535634 1127 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.15□□□□□ -1.91
APOC1P02654 TGIF1P1-201ENST00000558095 802 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.15□□□□□ -1.91
APOC1P02654 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.15□□□□□ -1.91
APOC1P02654 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.15□□□□□ -1.91
APOC1P02654 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.15□□□□□ -1.91
APOC1P02654 RNU1-30P-201ENST00000606575 163 ntBASIC3.15□□□□□ -1.91
APOC1P02654 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.15□□□□□ -1.91
APOC1P02654 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.15□□□□□ -1.91
APOC1P02654 AC123768.4-201ENST00000616244 701 ntBASIC3.15□□□□□ -1.91
APOC1P02654 AC092184.1-201ENST00000625042 715 ntBASIC3.15□□□□□ -1.91
APOC1P02654 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
APOC1P02654 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOC1P02654 NMD3P1-201ENST00000439704 1488 ntBASIC3.15□□□□□ -1.91
APOC1P02654 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOC1P02654 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOC1P02654 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOC1P02654 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
APOC1P02654 SKINT1L-201ENST00000401057 817 ntBASIC3.14□□□□□ -1.91
APOC1P02654 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
APOC1P02654 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.14□□□□□ -1.91
APOC1P02654 AC068533.1-201ENST00000418542 415 ntBASIC3.14□□□□□ -1.91
APOC1P02654 B3GNT2P1-201ENST00000434960 952 ntBASIC3.14□□□□□ -1.91
APOC1P02654 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
APOC1P02654 SNORD105B-201ENST00000458770 79 ntBASIC3.14□□□□□ -1.91
APOC1P02654 RPL23AP67-201ENST00000465341 474 ntBASIC3.14□□□□□ -1.91
APOC1P02654 RN7SL594P-201ENST00000470590 287 ntBASIC3.14□□□□□ -1.91
APOC1P02654 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.14□□□□□ -1.91
APOC1P02654 AC012181.1-201ENST00000479895 423 ntBASIC3.14□□□□□ -1.91
APOC1P02654 GAPDHP36-201ENST00000480688 918 ntBASIC3.14□□□□□ -1.91
APOC1P02654 RN7SL283P-201ENST00000489055 303 ntBASIC3.14□□□□□ -1.91
APOC1P02654 AC078918.1-201ENST00000498515 228 ntBASIC3.14□□□□□ -1.91
APOC1P02654 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.14□□□□□ -1.91
APOC1P02654 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.14□□□□□ -1.91
APOC1P02654 RN7SKP21-201ENST00000516503 220 ntBASIC3.14□□□□□ -1.91
APOC1P02654 RNU6-352P-201ENST00000516908 107 ntBASIC3.14□□□□□ -1.91
APOC1P02654 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APOC1P02654 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.14□□□□□ -1.91
APOC1P02654 AC023161.2-201ENST00000551218 780 ntBASIC3.14□□□□□ -1.91
APOC1P02654 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
APOC1P02654 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
APOC1P02654 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 AC019080.5-201ENST00000624891 757 ntBASIC3.14□□□□□ -1.91
APOC1P02654 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
APOC1P02654 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
APOC1P02654 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOC1P02654 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.13□□□□□ -1.91
APOC1P02654 AL136116.1-201ENST00000403591 381 ntBASIC3.13□□□□□ -1.91
APOC1P02654 AL583834.1-201ENST00000406943 343 ntBASIC3.13□□□□□ -1.91
APOC1P02654 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.13□□□□□ -1.91
APOC1P02654 MTCO3P21-201ENST00000430791 643 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms