Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 AC139103.1-201ENST00000534696 1030 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 ATP5F1P7-201ENST00000567330 760 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AC026741.1-201ENST00000605892 482 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AC008966.2-201ENST00000606157 453 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 AL513477.2-201ENST00000607858 568 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 AL359535.1-201ENST00000612100 1087 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 AC022079.2-201ENST00000619739 566 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AL138960.2-201ENST00000625145 535 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.13□□□□□ -1.75
PDGFBP01127 MIR4496-201ENST00000635896 61 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AC104446.1-201ENST00000613728 1321 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.13□□□□□ -1.75
PDGFBP01127 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.13□□□□□ -1.75
PDGFBP01127 AL356489.2-201ENST00000566968 3528 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.13□□□□□ -1.75
PDGFBP01127 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 ZNF833P-201ENST00000424938 1494 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 NMD3P1-201ENST00000439704 1488 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 RNU6-796P-201ENST00000391086 107 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 SNORD66.1-201ENST00000391230 76 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 AL122016.1-201ENST00000403365 367 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 PRRC2CP1-201ENST00000404428 159 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 MIR1911-201ENST00000410783 80 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 RNU4-27P-201ENST00000410889 139 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.12□□□□□ -1.75
PDGFBP01127 AL035423.1-201ENST00000420331 213 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 RPL23AP25-201ENST00000430973 463 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.12□□□□□ -1.75
PDGFBP01127 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.12□□□□□ -1.75
PDGFBP01127 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFBP01127 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC126121.1-201ENST00000482313 553 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 WBP1LP4-201ENST00000505043 344 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC008885.2-201ENST00000509506 930 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 KRT19P6-201ENST00000510983 209 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC124068.1-201ENST00000563131 678 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.12□□□□□ -1.75
PDGFBP01127 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.12□□□□□ -1.75
PDGFBP01127 AC010201.1-201ENST00000605051 540 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 AC092354.2-201ENST00000607786 514 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 AL031666.3-201ENST00000609320 1006 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 MIR8069-1-201ENST00000616627 86 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 MIR8069-2-201ENST00000621412 86 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 AC092608.3-201ENST00000625017 386 ntBASIC4.12□□□□□ -1.75
PDGFBP01127 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
PDGFBP01127 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDGFBP01127 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFBP01127 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFBP01127 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.11□□□□□ -1.75
PDGFBP01127 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFBP01127 AC092435.4-201ENST00000623012 4159 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 PRO1804-201ENST00000623780 2050 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 AL445183.3-201ENST00000414168 502 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 VN1R42P-201ENST00000424651 344 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 FABP5P3-201ENST00000437960 408 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.11□□□□□ -1.75
PDGFBP01127 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.11□□□□□ -1.75
PDGFBP01127 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.11□□□□□ -1.75
PDGFBP01127 RPL7P1-201ENST00000468161 747 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.11□□□□□ -1.75
PDGFBP01127 AC015908.1-201ENST00000478739 476 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AP000926.1-201ENST00000479573 241 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AC092902.1-201ENST00000486999 259 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 UBE2CP3-201ENST00000502715 450 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 MTCO2P9-201ENST00000503214 694 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 NAMPTP2-201ENST00000505629 1115 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms