Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC137768.1-201ENST00000549998 553 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 POLR2KP1-201ENST00000553226 168 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AL110118.1-201ENST00000553543 400 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 MIR4700-201ENST00000578311 74 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC069366.1-201ENST00000583159 838 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC005255.1-201ENST00000593748 216 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 VN1R83P-201ENST00000595685 445 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC091057.2-201ENST00000602594 792 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC139769.3-201ENST00000618383 175 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 Z99129.2-201ENST00000619967 314 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 MIR7703-201ENST00000620784 77 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.04□□□□□ -1.76
CLPTM1O96005 ZNF663P-202ENST00000641770 1131 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC138393.1-206ENST00000540997 1886 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.04□□□□□ -1.76
CLPTM1O96005 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
CLPTM1O96005 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 A2MP1-204ENST00000566278 4130 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC010300.1-201ENST00000600671 5134 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLPTM1O96005 RNU6-1339P-201ENST00000363574 91 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLPTM1O96005 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.03□□□□□ -1.76
CLPTM1O96005 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLPTM1O96005 EXTL2P1-201ENST00000446218 416 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 PTENP1-201ENST00000447117 1215 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 VN1R40P-201ENST00000455196 941 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC010326.1-201ENST00000462726 602 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC069528.1-202ENST00000482888 637 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 RPL23AP72-201ENST00000492447 435 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC108145.1-201ENST00000503770 153 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.03□□□□□ -1.76
CLPTM1O96005 AC010342.1-201ENST00000514047 877 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 CDH12P4-201ENST00000517835 295 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 CDH12P3-201ENST00000517935 295 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 IGKV2D-23-201ENST00000518179 286 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 CDH12P1-201ENST00000518435 295 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CLPTM1O96005 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLPTM1O96005 AC063949.1-201ENST00000552900 865 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 NIFKP8-201ENST00000560500 874 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC079171.1-201ENST00000568788 914 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.03□□□□□ -1.76
CLPTM1O96005 MIR4644-201ENST00000579929 84 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 PCNAP1-202ENST00000595299 752 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.03□□□□□ -1.76
CLPTM1O96005 AC073091.2-201ENST00000603205 907 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC025588.2-201ENST00000604851 466 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC007349.4-201ENST00000608114 532 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AP000238.1-201ENST00000608759 426 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AL445423.1-201ENST00000609941 536 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC024257.5-201ENST00000612739 531 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 U6.48-201ENST00000618523 106 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 AC015726.3-201ENST00000624501 418 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.03□□□□□ -1.76
CLPTM1O96005 LINC02211-204ENST00000642024 1070 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.03□□□□□ -1.76
CLPTM1O96005 NSRP1P1-201ENST00000444067 1693 ntBASIC4.03□□□□□ -1.76
CLPTM1O96005 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLPTM1O96005 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CLPTM1O96005 AC005261.4-201ENST00000600047 1385 ntBASIC4.02□□□□□ -1.77
CLPTM1O96005 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 AC104446.1-201ENST00000613728 1321 ntBASIC4.02□□□□□ -1.77
CLPTM1O96005 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CLPTM1O96005 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 RNA5SP505-201ENST00000364748 108 ntBASIC4.02□□□□□ -1.77
CLPTM1O96005 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.02□□□□□ -1.77
CLPTM1O96005 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CLPTM1O96005 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLPTM1O96005 MIR525-201ENST00000384978 85 ntBASIC4.02□□□□□ -1.77
CLPTM1O96005 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLPTM1O96005 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.02□□□□□ -1.77
CLPTM1O96005 AC136624.1-201ENST00000400791 413 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms