Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RN7SKP235-201ENST00000410662 305 ntBASIC3.97□□□□□ -1.77
SNX3O60493 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 OR4K6P-201ENST00000416478 897 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 AC002075.2-201ENST00000425207 252 ntBASIC3.97□□□□□ -1.77
SNX3O60493 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 RPL36P19-201ENST00000430744 301 ntBASIC3.97□□□□□ -1.77
SNX3O60493 MOB1AP1-201ENST00000430903 535 ntBASIC3.97□□□□□ -1.77
SNX3O60493 EEF1B2P5-201ENST00000444820 548 ntBASIC3.97□□□□□ -1.77
SNX3O60493 COX6CP18-201ENST00000448769 222 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AL162591.2-201ENST00000449634 317 ntBASIC3.97□□□□□ -1.77
SNX3O60493 RPL7P31-201ENST00000450192 724 ntBASIC3.97□□□□□ -1.77
SNX3O60493 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 NF1P3-201ENST00000457709 450 ntBASIC3.97□□□□□ -1.77
SNX3O60493 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 RN7SL727P-201ENST00000482164 296 ntBASIC3.97□□□□□ -1.77
SNX3O60493 DYNLL1P6-201ENST00000503440 264 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX3O60493 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 AC110775.1-201ENST00000513721 462 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 RNA5SP92-201ENST00000516437 110 ntBASIC3.97□□□□□ -1.77
SNX3O60493 RNA5SP34-201ENST00000516887 130 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX3O60493 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX3O60493 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 AP001207.1-201ENST00000524051 481 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX3O60493 PDCD5P1-201ENST00000543528 309 ntBASIC3.97□□□□□ -1.77
SNX3O60493 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX3O60493 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 EDDM3DP-201ENST00000554692 434 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AL132857.1-201ENST00000555180 708 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX3O60493 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX3O60493 MIR4644-201ENST00000579929 84 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 AC067852.4-201ENST00000590314 478 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC113403.1-201ENST00000604910 193 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX3O60493 AL138478.1-201ENST00000612252 832 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AL158163.2-201ENST00000619110 700 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX3O60493 AL049536.1-201ENST00000625043 744 ntBASIC3.97□□□□□ -1.77
SNX3O60493 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX3O60493 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX3O60493 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX3O60493 SDAD1P1-202ENST00000524156 2051 ntBASIC3.97□□□□□ -1.77
SNX3O60493 AC025031.4-201ENST00000621248 3271 ntBASIC3.97□□□□□ -1.77
SNX3O60493 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SNX3O60493 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SNX3O60493 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SNX3O60493 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX3O60493 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX3O60493 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SNX3O60493 RNU1-14P-201ENST00000362759 152 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RNU6-582P-201ENST00000362989 107 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RNU6-839P-201ENST00000363347 108 ntBASIC3.96□□□□□ -1.78
SNX3O60493 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 SNORA51.8-201ENST00000384234 132 ntBASIC3.96□□□□□ -1.78
SNX3O60493 HLFP1-201ENST00000402375 499 ntBASIC3.96□□□□□ -1.78
SNX3O60493 MIR1251-201ENST00000408552 70 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RNA5SP36-201ENST00000410197 133 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RN7SKP106-201ENST00000410832 272 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RNU4-22P-201ENST00000411058 166 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC004987.3-201ENST00000413879 771 ntBASIC3.96□□□□□ -1.78
SNX3O60493 MTATP6P20-201ENST00000414147 562 ntBASIC3.96□□□□□ -1.78
SNX3O60493 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX3O60493 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX3O60493 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 MFSD13B-201ENST00000420133 1290 ntBASIC3.96□□□□□ -1.78
SNX3O60493 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 AC092648.1-201ENST00000425870 423 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RPP40P1-201ENST00000426762 456 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 ELOCP6-201ENST00000429066 328 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AL358472.1-201ENST00000431295 329 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.96□□□□□ -1.78
SNX3O60493 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX3O60493 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX3O60493 Z99714.1-201ENST00000450463 807 ntBASIC3.96□□□□□ -1.78
SNX3O60493 DNAJC19P1-201ENST00000455312 319 ntBASIC3.96□□□□□ -1.78
SNX3O60493 ELOCP12-201ENST00000458706 328 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC134050.1-201ENST00000495088 933 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC008953.1-201ENST00000497334 318 ntBASIC3.96□□□□□ -1.78
SNX3O60493 HMGB1P21-201ENST00000502313 581 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC010460.2-201ENST00000509054 677 ntBASIC3.96□□□□□ -1.78
SNX3O60493 NDUFB4P12-201ENST00000513465 390 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RNU6-885P-201ENST00000516607 104 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RNA5SP135-201ENST00000517019 125 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RNU6-1231P-201ENST00000517185 103 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX3O60493 IGKV1-32-201ENST00000519290 311 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms