Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN4O14493 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.1□□□□□ -1.75
CLDN4O14493 RN7SL339P-201ENST00000580597 296 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 SLC25A36P1-201ENST00000590111 465 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.1□□□□□ -1.75
CLDN4O14493 AC105148.1-201ENST00000604961 409 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 HSPE1P14-201ENST00000605812 302 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AL354760.1-201ENST00000608357 643 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC009237.15-201ENST00000610252 501 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC004825.2-201ENST00000616634 455 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN4O14493 FP325313.1-201ENST00000638228 703 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 OR52H1-202ENST00000641796 1061 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 DCAF13P3-201ENST00000561147 1334 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CLDN4O14493 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN4O14493 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLDN4O14493 AC022893.2-201ENST00000564832 3296 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLDN4O14493 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN4O14493 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
CLDN4O14493 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CLDN4O14493 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN4O14493 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN4O14493 HMGB1P5-201ENST00000255320 642 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 RNU6-839P-201ENST00000363347 108 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 RNU6-1279P-201ENST00000383917 103 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AL139098.1-201ENST00000407291 389 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 RAC1P3-201ENST00000416129 580 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN4O14493 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN4O14493 AC106883.1-201ENST00000418805 562 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 RBMY1KP-201ENST00000423480 476 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN4O14493 HIGD1AP12-201ENST00000427832 281 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 HMGB1P16-201ENST00000447155 540 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN4O14493 NUTF2P7-201ENST00000453086 375 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN4O14493 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN4O14493 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLDN4O14493 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN4O14493 RNU6-415P-201ENST00000516252 97 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN4O14493 OR10V3P-201ENST00000525712 725 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN4O14493 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN4O14493 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN4O14493 AP003973.1-201ENST00000604639 691 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN4O14493 AP003117.2-201ENST00000606010 545 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AL157392.4-201ENST00000609756 345 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AC005962.2-201ENST00000611427 652 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN4O14493 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLDN4O14493 AC011944.2-201ENST00000624440 683 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 AC068620.4-201ENST00000636730 1182 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 FAM157B-203ENST00000639350 358 ntBASIC4.09□□□□□ -1.75
CLDN4O14493 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN4O14493 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLDN4O14493 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN4O14493 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN4O14493 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN4O14493 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.09□□□□□ -1.75
CLDN4O14493 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN4O14493 AC090229.1-201ENST00000590983 1609 ntBASIC4.09□□□□□ -1.76
CLDN4O14493 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.09□□□□□ -1.76
CLDN4O14493 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN4O14493 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN4O14493 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN4O14493 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN4O14493 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLDN4O14493 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN4O14493 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CLDN4O14493 RNU6-582P-201ENST00000362989 107 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 RNU4-51P-201ENST00000364206 140 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 RNU6-707P-201ENST00000364647 95 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN4O14493 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN4O14493 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN4O14493 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN4O14493 RNA5SP372-201ENST00000390836 115 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 MTCO3P31-201ENST00000405526 789 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 MIR1911-201ENST00000410783 80 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 MTCO2P8-201ENST00000412213 658 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 AC073335.1-201ENST00000427776 363 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 AL031313.1-201ENST00000448435 256 ntBASIC4.08□□□□□ -1.76
CLDN4O14493 NDUFA5P7-201ENST00000452914 242 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 373 ms