Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 AC005668.1-201ENST00000571142 476 ntBASIC6.05□□□□□ -1.44
SOX1O00570 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
SOX1O00570 AP001521.2-201ENST00000608772 546 ntBASIC6.05□□□□□ -1.44
SOX1O00570 AL445647.2-201ENST00000615170 130 ntBASIC6.05□□□□□ -1.44
SOX1O00570 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 CYP4F35P-202ENST00000636121 390 ntBASIC6.05□□□□□ -1.44
SOX1O00570 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SOX1O00570 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 AC062029.1-202ENST00000606164 3651 ntBASIC6.04□□□□□ -1.44
SOX1O00570 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 Y_RNA.132-201ENST00000363421 102 ntBASIC6.04□□□□□ -1.44
SOX1O00570 RNU6-952P-201ENST00000391164 108 ntBASIC6.04□□□□□ -1.44
SOX1O00570 RNU6-1158P-201ENST00000391167 107 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC068050.1-201ENST00000394891 380 ntBASIC6.04□□□□□ -1.44
SOX1O00570 SNORA11F-201ENST00000408237 128 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX1O00570 AC119751.6-201ENST00000416712 186 ntBASIC6.04□□□□□ -1.44
SOX1O00570 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 FABP5P2-201ENST00000439042 408 ntBASIC6.04□□□□□ -1.44
SOX1O00570 RPL23AP60-201ENST00000450011 454 ntBASIC6.04□□□□□ -1.44
SOX1O00570 PRPF38AP1-201ENST00000451976 933 ntBASIC6.04□□□□□ -1.44
SOX1O00570 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX1O00570 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 Y_RNA.632-201ENST00000459189 102 ntBASIC6.04□□□□□ -1.44
SOX1O00570 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 SNORA58-201ENST00000505219 137 ntBASIC6.04□□□□□ -1.44
SOX1O00570 SNORA40.12-201ENST00000516329 111 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX1O00570 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 AC087241.2-201ENST00000535801 324 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AP006289.1-201ENST00000538089 277 ntBASIC6.04□□□□□ -1.44
SOX1O00570 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SOX1O00570 HSPE1P3-201ENST00000559254 309 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 MIR4284-201ENST00000578924 81 ntBASIC6.04□□□□□ -1.44
SOX1O00570 MIR3167-201ENST00000579623 85 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.04□□□□□ -1.44
SOX1O00570 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 AC115621.1-201ENST00000604653 858 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC090948.1-201ENST00000607464 549 ntBASIC6.04□□□□□ -1.44
SOX1O00570 BX664608.1-201ENST00000610519 487 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC009237.17-201ENST00000618111 748 ntBASIC6.04□□□□□ -1.44
SOX1O00570 C2orf27A-204ENST00000623058 969 ntBASIC6.04□□□□□ -1.44
SOX1O00570 AC068724.3-201ENST00000625906 87 ntBASIC6.04□□□□□ -1.44
SOX1O00570 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 NUP58P1-201ENST00000502546 1738 ntBASIC6.04□□□□□ -1.44
SOX1O00570 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SOX1O00570 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX1O00570 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX1O00570 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
SOX1O00570 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 AC092162.3-201ENST00000624511 1624 ntBASIC6.03□□□□□ -1.44
SOX1O00570 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SOX1O00570 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX1O00570 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SOX1O00570 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 AC068733.2-201ENST00000605434 1418 ntBASIC6.03□□□□□ -1.44
SOX1O00570 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 AC079741.1-201ENST00000321498 212 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms