Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 MIR6853-201ENST00000619642 74 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC135352.1-201ENST00000506173 1418 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC087359.1-201ENST00000508335 1740 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AP000542.2-201ENST00000623199 6179 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 MTCO1P14-201ENST00000441695 1559 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 RNU6-621P-201ENST00000364752 109 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 MIR649-201ENST00000384843 97 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 ATP5F1P4-201ENST00000397288 746 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC073264.1-201ENST00000411508 416 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 USP9YP33-201ENST00000412220 421 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN3O00409 RPS15AP40-201ENST00000419621 391 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN3O00409 RPL30P3-201ENST00000424262 333 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 USP9YP35-201ENST00000435696 412 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN3O00409 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN3O00409 RPL23AP35-201ENST00000451906 501 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 HIGD1AP8-201ENST00000453927 274 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN3O00409 RPL36AP41-201ENST00000493820 306 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN3O00409 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN3O00409 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN3O00409 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.97□□□□□ -1.61
FOXN3O00409 SNX5P1-201ENST00000505757 1041 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN3O00409 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.97□□□□□ -1.61
FOXN3O00409 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 RNA5SP446-201ENST00000515955 82 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN3O00409 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN3O00409 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.97□□□□□ -1.61
FOXN3O00409 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN3O00409 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN3O00409 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN3O00409 LSM6P2-201ENST00000552208 177 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC090888.1-201ENST00000561335 1141 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC124068.1-201ENST00000563131 678 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 MIR3934-201ENST00000579806 107 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 MIR4737-201ENST00000583979 81 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC107982.3-201ENST00000584957 985 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AL512782.1-201ENST00000603093 364 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC233280.2-201ENST00000603917 1070 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN3O00409 AL451086.1-201ENST00000605596 223 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC113194.1-201ENST00000606037 500 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC010857.1-201ENST00000606398 594 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 AC211433.2-201ENST00000608433 387 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN3O00409 AC007671.2-201ENST00000637344 619 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 AL022322.2-201ENST00000624072 20397 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN3O00409 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 AL391684.1-202ENST00000641293 1636 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
FOXN3O00409 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
FOXN3O00409 AC108751.5-201ENST00000492880 1336 ntBASIC4.97□□□□□ -1.61
FOXN3O00409 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN3O00409 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
FOXN3O00409 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
FOXN3O00409 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
FOXN3O00409 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 RNU6-931P-201ENST00000363850 107 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 MIR708-201ENST00000390708 88 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 MIR921-201ENST00000401133 56 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AL023807.1-201ENST00000407932 359 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AL450338.1-201ENST00000407987 512 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 RN7SKP267-201ENST00000410381 285 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 SDCBPP2-201ENST00000424643 885 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AL590762.4-201ENST00000425885 253 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC104837.2-201ENST00000427236 424 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.96□□□□□ -1.62
FOXN3O00409 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXN3O00409 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 AC092427.1-201ENST00000439177 601 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 UBE2D3P4-201ENST00000441973 436 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 RPS26P56-201ENST00000444468 240 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 VN1R10P-201ENST00000447106 875 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 ISCUP1-201ENST00000454451 448 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 MTCO3P16-201ENST00000454456 754 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC091685.2-201ENST00000454924 864 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXN3O00409 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
FOXN3O00409 RPL7P38-201ENST00000488396 739 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms