Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.35□□□□□ -1.87
UPK1AO00322 SNORD116-26-201ENST00000516006 96 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.35□□□□□ -1.87
UPK1AO00322 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1AO00322 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1AO00322 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.35□□□□□ -1.87
UPK1AO00322 AC106785.1-201ENST00000565935 262 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 MIR4512-201ENST00000583257 77 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.35□□□□□ -1.87
UPK1AO00322 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AC116563.2-201ENST00000624751 535 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1AO00322 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1AO00322 AL118496.1-201ENST00000440201 1812 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPK1AO00322 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPK1AO00322 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPK1AO00322 RNU1-75P-201ENST00000347264 129 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UPK1AO00322 CYCSP19-201ENST00000411715 316 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.34□□□□□ -1.87
UPK1AO00322 ATP5A1P2-201ENST00000412323 255 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AC013404.1-201ENST00000413068 249 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AC068533.1-201ENST00000418542 415 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 RPL17P36-201ENST00000420302 549 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.34□□□□□ -1.87
UPK1AO00322 GLRXP1-201ENST00000423261 334 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AL445584.1-201ENST00000431451 330 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 MRPS18BP2-201ENST00000434310 759 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
UPK1AO00322 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.34□□□□□ -1.87
UPK1AO00322 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.34□□□□□ -1.87
UPK1AO00322 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.34□□□□□ -1.87
UPK1AO00322 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.34□□□□□ -1.87
UPK1AO00322 RPL12P26-201ENST00000452430 487 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AL136097.1-201ENST00000456945 913 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 RNU7-170P-201ENST00000459303 61 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 FTH1P24-201ENST00000503502 462 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 HMGN1P11-201ENST00000508668 303 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 FABP5P6-201ENST00000510588 409 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 HMGB1P47-201ENST00000511281 589 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.34□□□□□ -1.87
UPK1AO00322 AC108120.2-201ENST00000512973 294 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AP000926.4-201ENST00000527351 454 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
UPK1AO00322 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.34□□□□□ -1.87
UPK1AO00322 AC074029.2-201ENST00000551045 634 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
UPK1AO00322 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.34□□□□□ -1.87
UPK1AO00322 AC106785.3-201ENST00000564064 847 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.34□□□□□ -1.87
UPK1AO00322 AC090525.3-201ENST00000605601 189 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.34□□□□□ -1.87
UPK1AO00322 AL121772.2-201ENST00000614331 297 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AC011472.4-201ENST00000615848 491 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 AC069209.1-201ENST00000619282 651 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPK1AO00322 AL513302.2-201ENST00000562313 1842 ntBASIC3.34□□□□□ -1.87
UPK1AO00322 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.34□□□□□ -1.87
UPK1AO00322 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
UPK1AO00322 AC026951.1-201ENST00000559530 2459 ntBASIC3.34□□□□□ -1.88
UPK1AO00322 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.33□□□□□ -1.88
UPK1AO00322 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
UPK1AO00322 RAD1P1-201ENST00000231383 813 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
UPK1AO00322 SNORD9-201ENST00000362566 104 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 MIR421-201ENST00000365696 85 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
UPK1AO00322 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UPK1AO00322 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
UPK1AO00322 RPL21P17-201ENST00000397467 475 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 SKINT1L-201ENST00000401057 817 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AP000907.1-201ENST00000428428 510 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.33□□□□□ -1.88
UPK1AO00322 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.33□□□□□ -1.88
UPK1AO00322 TXNP1-201ENST00000441872 371 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 RPL7P31-201ENST00000450192 724 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UPK1AO00322 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.33□□□□□ -1.88
UPK1AO00322 AC007537.2-201ENST00000472093 511 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.33□□□□□ -1.88
UPK1AO00322 IGKV2-23-201ENST00000518729 323 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UPK1AO00322 PDCL2P2-201ENST00000533651 189 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.33□□□□□ -1.88
UPK1AO00322 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.33□□□□□ -1.88
UPK1AO00322 DUXAP6-201ENST00000553858 601 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
UPK1AO00322 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.33□□□□□ -1.88
UPK1AO00322 MIR4458-201ENST00000578872 75 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AC022387.2-201ENST00000604050 448 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AC005972.3-201ENST00000606304 481 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AC084036.1-201ENST00000609190 508 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AC123768.4-201ENST00000616244 701 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 AC007342.8-201ENST00000623278 678 ntBASIC3.33□□□□□ -1.88
UPK1AO00322 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
UPK1AO00322 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UPK1AO00322 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms