Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 IFNWP4-201ENST00000453148 294 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 RPL23AP73-201ENST00000492507 471 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 SMARCE1P4-201ENST00000523647 241 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 HMGB3P26-201ENST00000560051 582 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AC233266.2-201ENST00000567067 528 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 ZNF92P2-201ENST00000600543 1059 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 MIR7851-201ENST00000610611 160 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AC011472.4-201ENST00000615848 491 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AL732372.2-225ENST00000642124 456 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AL627171.1-201ENST00000618845 1308 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 AC083899.2-201ENST00000423285 1376 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AL049781.1-201ENST00000623195 3585 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 OR52B1P-201ENST00000316506 909 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 TAF9BP2-201ENST00000400856 499 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AL121834.1-202ENST00000404494 277 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AP000907.1-201ENST00000428428 510 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 RPL23AP23-201ENST00000452590 471 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 PRSS3P4-201ENST00000453323 162 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 U3.44-201ENST00000458938 192 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 RNU7-27P-201ENST00000459281 62 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 MTND6P6-201ENST00000478031 263 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-579P-201ENST00000516879 102 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 KLKP1-201ENST00000595979 403 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 PSMA6P4-201ENST00000603247 718 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 AC015849.2-201ENST00000605738 409 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 MIR7975-201ENST00000619350 68 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 U4.6-201ENST00000621618 127 ntBASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMIM28A0A1B0GU29 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SMIM28A0A1B0GU29 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
SMIM28A0A1B0GU29 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
SMIM28A0A1B0GU29 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.84□□□□□ -1.8
SMIM28A0A1B0GU29 AC074029.4-201ENST00000624796 1859 ntBASIC3.84□□□□□ -1.8
SMIM28A0A1B0GU29 AL049555.1-201ENST00000562834 1933 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 ZNF90P1-201ENST00000480493 1951 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 PRO1804-201ENST00000623780 2050 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 BX842559.1-201ENST00000419615 532 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AL160175.1-201ENST00000428124 247 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 RPL17P35-201ENST00000432217 549 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AL035458.1-201ENST00000433096 585 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 RPL7P48-201ENST00000461513 746 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 MTND3P24-201ENST00000506306 329 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 SNORA31.13-201ENST00000516624 135 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC090819.1-201ENST00000523800 1111 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AL049870.4-201ENST00000555741 486 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC084757.1-201ENST00000559987 490 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AL109741.3-201ENST00000561748 592 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms