Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC079809.1-201ENST00000415468 276 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC092162.1-201ENST00000432828 434 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 USP9YP22-201ENST00000438971 294 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 MTND1P30-201ENST00000441241 901 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 COX6CP2-201ENST00000444980 225 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 MTCO2P25-201ENST00000447065 681 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 IFNWP4-201ENST00000453148 294 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 SUMO2P2-201ENST00000456482 255 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 ENPP7P11-201ENST00000505915 627 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 CBX3P3-201ENST00000508108 532 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 CDC42P4-201ENST00000510507 563 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 HMGB3P13-201ENST00000511263 607 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 SNORD116-26-201ENST00000516006 96 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 RN7SKP92-201ENST00000517266 244 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 NRON-201ENST00000517270 370 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 MTND4LP26-201ENST00000518144 282 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 OR5G4P-201ENST00000525251 760 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AP002963.1-201ENST00000530590 184 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AP001317.1-201ENST00000531194 960 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 NIFKP8-201ENST00000560500 874 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 ROCK1P1-201ENST00000573767 549 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC022726.1-201ENST00000587475 207 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC093765.1-201ENST00000603758 881 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 BNIP3P4-201ENST00000604946 565 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC018714.1-201ENST00000605028 208 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC012414.7-202ENST00000622705 1090 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC068137.3-201ENST00000639191 341 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC073869.6-201ENST00000640656 341 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 CASC19-204ENST00000641001 2055 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 U3.30-201ENST00000391308 210 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 GLULP6-201ENST00000399502 913 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 RPL7P8-201ENST00000411964 730 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 MRPS36P1-201ENST00000421291 307 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 DPRXP1-201ENST00000426312 460 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 OR2B8P-201ENST00000432841 938 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 FTH1P16-201ENST00000435241 552 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 HMGB1P45-201ENST00000435986 653 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 CFTRP1-201ENST00000456646 183 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 MTND6P6-201ENST00000478031 263 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC079140.3-201ENST00000511111 550 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC100784.1-201ENST00000522790 310 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 HNRNPCP4-201ENST00000571636 900 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 MIR4716-201ENST00000579628 84 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 SS18L2P2-201ENST00000583960 235 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC087683.1-201ENST00000591187 441 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC090181.2-201ENST00000602975 672 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC008745.1-201ENST00000604064 271 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AL121932.1-201ENST00000605542 214 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC108747.1-201ENST00000609508 535 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC019193.2-201ENST00000610012 634 ntBASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTDP1Q9Y5B0 AC087241.4-201ENST00000612441 480 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms