Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC114814.2-201ENST00000419195 485 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 RPL31P12-201ENST00000422587 358 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC009965.2-201ENST00000425328 970 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AL590762.3-201ENST00000436372 640 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC074367.1-201ENST00000438685 1125 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 RPS17P13-201ENST00000448974 407 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 OR9M1P-201ENST00000459641 921 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC010468.1-201ENST00000461022 817 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC068587.1-201ENST00000483613 781 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 PRELID3BP5-201ENST00000508612 460 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC025768.1-201ENST00000510057 267 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 RN7SKP209-201ENST00000516888 304 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 SNORA76.2-201ENST00000517095 137 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 CYCSP30-201ENST00000546447 172 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AP006248.3-201ENST00000623580 594 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 AF001550.2-201ENST00000636643 217 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 EXOC5P1-201ENST00000510543 1969 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 RNU6-452P-201ENST00000384406 107 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 HMGB1P10-201ENST00000395823 563 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 RNU2-17P-201ENST00000410290 190 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 RN7SKP263-201ENST00000411194 309 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 XKRYP4-201ENST00000414395 483 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 NIPA2P1-201ENST00000426223 976 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 XKRYP5-201ENST00000449659 483 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 CYCSP53-201ENST00000455540 265 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 RPL23AP73-201ENST00000492507 471 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 MTND3P24-201ENST00000506306 329 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 SNORA31.13-201ENST00000516624 135 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC090877.1-201ENST00000561418 344 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 MIR3160-1-201ENST00000577972 85 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 MIR548Y-201ENST00000582739 110 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC022916.3-201ENST00000592961 742 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 MIR7973-1-201ENST00000614683 76 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC123768.4-201ENST00000616244 701 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AC068724.3-201ENST00000625906 87 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 FRG1DP-201ENST00000635586 771 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 AL118496.1-201ENST00000440201 1812 ntBASIC3.47□□□□□ -1.85
TRAPPC4Q9Y296 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TRAPPC4Q9Y296 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TRAPPC4Q9Y296 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TRAPPC4Q9Y296 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRAPPC4Q9Y296 U3.15-201ENST00000365398 212 ntBASIC3.46□□□□□ -1.86
TRAPPC4Q9Y296 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.46□□□□□ -1.86
TRAPPC4Q9Y296 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
TRAPPC4Q9Y296 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.46□□□□□ -1.86
TRAPPC4Q9Y296 SNORA57.3-201ENST00000411095 141 ntBASIC3.46□□□□□ -1.86
TRAPPC4Q9Y296 AC105402.1-201ENST00000413336 545 ntBASIC3.46□□□□□ -1.86
TRAPPC4Q9Y296 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms